| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0558 |
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| Symbol | |
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| ID | 4920416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 632038 |
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| End bp | 633051 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162087 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_001092689 |
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| Protein GI | 127511492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.806165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.213457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCA ATCATGAGAA ACGGCTGCAG CGCAAAGACG CAAAAGAAAC AACCATTGAG
TTACAGGATA GCTCACTGGG GCCAGAACAG CTGGGCACCG TCATCTCTCG CTTCGGCCAA
CACGCTGATG TCGAAACGGA AAACGGTGAA CTGGTTCGCT GTAACATTCG CCGAAATATT
CAAAGCCTGG TCACCGGCGA TAAGGTGATC ATGCGCCAAG CCAGTGAAAC CACAGCCACC
ATAGCCGGCG TGGTCGAGGC CGTTCATCCG AGACACTCCT CACTGTCGCG GCCGGATCTC
TACGACGGCA TCAAGATCAT CGCCGCCAAT ATCGATCAGA TACTCATAGT CTCTTCCGTG
GTACCTAGCT TTACCACTCA GATTATCGAC CGCTATCTGG TGGCCGCCGA AGACACAGGC
ATAGCCCCGG TCATCATACT CAACAAGATA GATCTACTCA GCGACGAAGA GGCTCCTGCC
GTCGAGGCCG CGCTGGAGCG CTACCAGGCC ATCGGCTATC AGGTATATCG CGTCAGCAGC
AAGTCTGGCG AAGGGGTCGA GGCGATCAAG ACCCTATTAA AAGACAAGGT CAGCGTGTTT
GTCGGTCAGT CAGGTGTGGG TAAGTCATCG CTGATCAACG CCCTGCTGCC GGAAGCCGAA
CTCATTACAG GCGACGTGTC CGAAACCTCG GGCCTTGGCC AACACACCAC CACCACGGCC
AAGTTGCTAC ACTTCCCAAG CGGCGGCGAT CTGGTGGACT CTCCCGGTGT GCGTGAATTC
GCCCTATGGC ACCTGCCTGC CGAGCGTGTC GGCTGGTGCT TCGTTGAATT CAGGGATTAC
CTAGGCACCT GCAAGTTTAG AGACTGTAAA CACAAGAATG ACCCTGGCTG CGCCATCACC
CAGGCCTTCG AGGAAGGCAA GATCGCCCAG GACAGGTACC AGAACTACCA CAGAATTATC
GACAGCCTGG ACGAGCAGCG CCACGCCCGT CATTTCAAAA ACGATAACGA CTAA
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| Protein sequence | MRANHEKRLQ RKDAKETTIE LQDSSLGPEQ LGTVISRFGQ HADVETENGE LVRCNIRRNI
QSLVTGDKVI MRQASETTAT IAGVVEAVHP RHSSLSRPDL YDGIKIIAAN IDQILIVSSV
VPSFTTQIID RYLVAAEDTG IAPVIILNKI DLLSDEEAPA VEAALERYQA IGYQVYRVSS
KSGEGVEAIK TLLKDKVSVF VGQSGVGKSS LINALLPEAE LITGDVSETS GLGQHTTTTA
KLLHFPSGGD LVDSPGVREF ALWHLPAERV GWCFVEFRDY LGTCKFRDCK HKNDPGCAIT
QAFEEGKIAQ DRYQNYHRII DSLDEQRHAR HFKNDND
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