Gene Shew_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0552 
Symbol 
ID4921914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp624267 
End bp624458 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content49% 
IMG OID640162081 
ProductBFD/(2Fe-2S)-binding domain-containing protein 
Protein accessionYP_001092683 
Protein GI127511486 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2906] Bacterioferritin-associated ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.307595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTTT GCCTTTGCCA CGCCATTACC GACAAGCAAA TAAAAGAAGC TGTCGATCAA 
GGAGATATGT CTCTTGCCGA CGTTAAGCGT CGTCTGGGTG TTGGCAATCA ATGTGGTAAA
TGTAGCAAGA TGGCCACCGA GATCATCCAG GCCCGCCTCG ATGTAACCCC CAACTTCTAC
GAAGTGGCTT AG
 
Protein sequence
MYVCLCHAIT DKQIKEAVDQ GDMSLADVKR RLGVGNQCGK CSKMATEIIQ ARLDVTPNFY 
EVA