| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0530 |
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| Symbol | |
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| ID | 4920742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 599363 |
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| End bp | 600490 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162059 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001092661 |
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| Protein GI | 127511464 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC TTGATGCGAT CGTTATCGGT GCCGGTGTGG TTGGGCTCGC GGTGGCGGCT
AGCTTGAGTC GGCGTTTTGG CAATGTGCTG ATCATAGATC GCGCCGAGAC CATAGGCACA
GGCATCAGCA GTCGCAACAG CGAGGTGATC CACGCAGGGA TCTACTACCC GACGGGGAGC
CTCAAGGCGC AGCTTTGCGT AGAGGGTAAA CGGCAGCTGT ATGCCTATTG TCGTCGCCGG
GGTGTCGCCG TGAATTCCCT GGGTAAGCTG ATAGTGGCGA CTCAGGTCGA GCAGGAGGCG
CAGCTCGACG CCTTGTTCAC TCAAGCTCGG GCCAATGGGG TCGATGATCT TAACCCCCTT
GGTCGCCGGC AACTGCAGGC ACTCGAGCCG GCGCTCAAGG CATCTGCCGG GTTACTCTCT
CCCTCTACAG GTATTGTCGA CAGTCATGGC TTGATGCTGA GTCTGCTGGC CGAGGCGGAG
GAGTATGGCG CGATATTCTG CCCTCATACC GAGTTTATCA CCACCCAGGC CGATGCGAAT
GGCTTCAGGG TGGAGCTGAT GCAGCAAGGG GAGCGGGTGA GTCTGGAGAC CAGCTTTCTG
ATCAACTGCG CCGGATTATT TGCCACAGAG GTGGCGACGC GTATTGAGGG GCTGGCAGAG
TCGCTCGTTC CACAGCTTTA TTGGTGCAAG GGGCATTACT TTGCCTATCA GGGCAAGAGT
CCGTTTGCGC ATCTTATCTA TCCCGTGCCC GAGCCAGGGC TGAAAGGCTT AGGAATACAC
GCCACCATAG ATCTCGGCGG CCAGCTTAAG TTTGGCCCGG ATGCTCAATA CATGGTACCT
GACTCTCTGG AAGACTATCG GGTGCCAGAA GCGCTGCGCC AGCGTTTTCA TCAGGCGATC
GCGAGCTATT ACCCAGGCAT AGCAATTGAG CGGCTACAGA CTGCCTACGC CGGGATCCGC
CCTAAGCTAC AGGGGCCAGA TGACACCGAG GTGGCTGATT TCTTGATTCA GGGGGAGGCG
CAGCATGGCA TACCAGGCTT GGTGAATCTG CTGGGAATCG AATCCCCCGG ATTAACGGCG
AGTCTGGCCA TTGCCGAGCA GGTCTCTCGG CAGTTAGTGA CGCCATAA
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| Protein sequence | MDKLDAIVIG AGVVGLAVAA SLSRRFGNVL IIDRAETIGT GISSRNSEVI HAGIYYPTGS
LKAQLCVEGK RQLYAYCRRR GVAVNSLGKL IVATQVEQEA QLDALFTQAR ANGVDDLNPL
GRRQLQALEP ALKASAGLLS PSTGIVDSHG LMLSLLAEAE EYGAIFCPHT EFITTQADAN
GFRVELMQQG ERVSLETSFL INCAGLFATE VATRIEGLAE SLVPQLYWCK GHYFAYQGKS
PFAHLIYPVP EPGLKGLGIH ATIDLGGQLK FGPDAQYMVP DSLEDYRVPE ALRQRFHQAI
ASYYPGIAIE RLQTAYAGIR PKLQGPDDTE VADFLIQGEA QHGIPGLVNL LGIESPGLTA
SLAIAEQVSR QLVTP
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