Gene Shew_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0526 
Symbol 
ID4923179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp596035 
End bp596406 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content48% 
IMG OID640162055 
Producthypothetical protein 
Protein accessionYP_001092657 
Protein GI127511460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA GCGCCATCAT GCTCTTAGGC CTGCTTGTTC TCGCGGGATG TAGCAATTTA 
ACGCTGACGA CCAATATCTC ACCTGAAGAA GCGTTAAAGA CCTCTAAGGT GGAGGAGTAT
AGTATGGCCG AAATTGGCCG TTATAAGGCG GATTATCTGG GGAAAGTGTC AACCTCTATG
TGCCGTACCC GCTCTACTCA GCCGAAACCG ACCGAGTCAT TATTGGTTGG CAATCTCAAA
TATAAGGCGC AGAAGTTGGG AGCTAACGGC ATAGTCGTCA TGGAGTGTGT CGATCATAAA
ATCAATAACG ATTGTCCTGA GTTCTTGCGC TGTGATGCGC TGGCTTATCG CGTCGACTTC
GACGCCCTGT AA
 
Protein sequence
MKNSAIMLLG LLVLAGCSNL TLTTNISPEE ALKTSKVEEY SMAEIGRYKA DYLGKVSTSM 
CRTRSTQPKP TESLLVGNLK YKAQKLGANG IVVMECVDHK INNDCPEFLR CDALAYRVDF
DAL