| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0521 |
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| Symbol | metL |
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| ID | 4924078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 590362 |
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| End bp | 592755 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162050 |
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| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
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| Protein accession | YP_001092652 |
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| Protein GI | 127511455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGAT GTCATTTGCA TAAGTTTGGT GGTTCTAGTT TAGCGGATGC AGATTGTTAC
CGCCGCGTCG CCCACATTTT ACTGACCCAT GGCCACAGCG ATGATCTTAT CGTGGTGTCG
GCTGCGGGTA AGAGTACCAA TTTCCTATAT CGCCTGCTGG AGCTGTGCGA CACAGATCAG
CTGTGGCAGG AAGAGTTACA GGTGCTGGTG AGTTACCAGC AGAACCTGAT CGAGCAGCTG
CTCTCCAACG AGCAGGCCCG CAGCCTGAGA GAACGACTGG CCACCGACAA GTCGCAGCTG
ACCAGCCTGC TGTCGCTGGA TGAACTGAAC GACTATCAAC GCAACCAGGT GGTGAGTTTC
GGCGAGCGCT GGTCTTCCTG TCTGCTGGCG GCGCTGCTGC GCGAGTCTGG CGTGGCGGCG
ACCGATGTCG ATGCCCGCAC CCTACTGGTC GCCGATGAAG GCGCCGTGCC GCAGATCCGC
CTTGGCGAGT CACGCCAGAA GGTGCAGGCA CTGCTCGAGG CTCATCCCCA GGAGCGTCTG
GTGATCACCG GCTTTATCTG CGCCAACGAG CAGGGCGATA CCCTGCTGCT GGGCCGTAAC
GGCTCAGATT TTAGCGCCAC CTTACTGGCT AGCCTGGCGG ATATCGAACG TGTCACCATC
TGGACAGATG TGGAAGGGGT GTTCAACGCC GACCCTAACC GAATTAACGA TGCCAAGTTG
CTTAAGAGTA TGTCGCTCAC CGAGGCCAAC CGCCTGGCGC ACCTTGGCTC TCCGGTGCTG
CATAACCGCA CTCTGCAGCC ATTGTTCGAC ACCGAAGTCA GCCTGGCGGT GCGTTCAAGC
TACGCACCCC ATACAGATTT TACCCTGATC GCCCCTAAGA GCTCCTCGGC CAGTGCCCCT
GTGGTGACCA GCCTCTCCAG CGTCAGTCTG TTTAGCTTGA CCATATCGGT CGAACTGCCT
CAGCTGCTGG CCTGTTTTGC CCAGGCAGGT TTGACGCCAC TGGCCTATTG GTCGTTGGCC
CACGGTCGCG CCGAACTGGC CTTTACCCAT GAGAATCAGA AGCAGGCCCA GGCGATCTTC
GAGGCCAAGC GCAGCGAACT TGGAATCGAT GAGTTACAGC TGCGTGACGA TCTCGGCCTG
GTGGCCCTGG TAAGCGCCGA TGCCAGCCTC TATCGCCGCG GCTTCTCGCG TCTGTTGAGC
CGTGAGGCCC ATCCTCTGTG TAATGATGGC CTTAGCCTGG TGACTCTGGT GCCTAAGGCG
CAGGTGAACC TGTTGACCCA GAAGGTGCAC AGACGCTGCG CCGGTCCGCG CAAGCGTATC
GGTGTCCTGC TGCTGGGCAT AGGCAACATA GGCGAAGCCT GGATCGATCT CTTCAAGCGG
GCTCGCCCAG TGCTCAATAA GGAGCTTGAG GTCAGCGTCG AGCTGGTGGG ACTCTTGAGT
TCCAAGAAGG CGCTGCTGAG CGAGACAGAT ATTGATTTAA GCAGCTGGCA GCAGGCCTTC
GAGGAGCGCG GTACCGGTTG GCAGTACACC CATCTGTTTG AGCAGTTGCA GGCACTAAAT
TGCGATGAGT TGATCGCCCT GGACATCAGC GCCAGCGCCG ATCTCACCCT GCAATATCCC
GAGTTTTTTG CCCGCGGCAT TCATATCGTC AGTGCCAACA AGCTGGCGGG TTCTGGGCCG
CTGGCCTTCT ATCAGGAGCT GAAACAGCAA CTGGGTAATC GCCGTCTGTT CTGGCGTTAT
AACGCCAGCT GTGGTGCGGG CCTGCCGGTG CAACATGCGC TAAATGATCT GCATAACAGC
GGTGACAGCA TAGAGGCGGT CGGCGGCATC TTCTCCGGTA CCCTGTGCTG GCTGTTCGAG
CACTATGACG CCAAGAAACC CTTCTCCGAG CTGGTGCTGG AGGCCAAGGG GCTGGGTATT
ACCGAGCCGG ATCCCCGCGA CGACCTCTCC GGCCGGGACA TGCAGCGCAA GTTGCTGATC
TTGGCCCGTG AGATAGGTTA CGACATTGAG CTGGACGATA TCGAGCTGGA GTCTCTGGTG
CCGACTAAGC TGGCCGAGAT CCCGCTGGAT GATTTCATCA AGCGTATGGC GGAGCTCGAT
GGCGAGATGT TGCAGCAGTA TCAGGCGGCT GCCGAGCAGA ACAAGGTGCT CAGGTATGTG
GCGTCATTGG ATTCAGAACA GGGCCAGCTC AAGGCCAAGG TGGGGATCCA GTGGGTCGAT
AGGAGCCACC CGTATGCCAA TTTGACGCCG GGCGATAATG TCTTCGTGAT CCGCAGCGAT
TTCTATCAGG ACAATCCGCT GATCATACGT GGCCCGGGCG CCGGGCGTGA GGTGACGGCT
GCCGCGGTGC AGTCGGATCT GGCGCAGATC TGCCGGGATC TCCTGCAAGA ATAA
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| Protein sequence | MTRCHLHKFG GSSLADADCY RRVAHILLTH GHSDDLIVVS AAGKSTNFLY RLLELCDTDQ
LWQEELQVLV SYQQNLIEQL LSNEQARSLR ERLATDKSQL TSLLSLDELN DYQRNQVVSF
GERWSSCLLA ALLRESGVAA TDVDARTLLV ADEGAVPQIR LGESRQKVQA LLEAHPQERL
VITGFICANE QGDTLLLGRN GSDFSATLLA SLADIERVTI WTDVEGVFNA DPNRINDAKL
LKSMSLTEAN RLAHLGSPVL HNRTLQPLFD TEVSLAVRSS YAPHTDFTLI APKSSSASAP
VVTSLSSVSL FSLTISVELP QLLACFAQAG LTPLAYWSLA HGRAELAFTH ENQKQAQAIF
EAKRSELGID ELQLRDDLGL VALVSADASL YRRGFSRLLS REAHPLCNDG LSLVTLVPKA
QVNLLTQKVH RRCAGPRKRI GVLLLGIGNI GEAWIDLFKR ARPVLNKELE VSVELVGLLS
SKKALLSETD IDLSSWQQAF EERGTGWQYT HLFEQLQALN CDELIALDIS ASADLTLQYP
EFFARGIHIV SANKLAGSGP LAFYQELKQQ LGNRRLFWRY NASCGAGLPV QHALNDLHNS
GDSIEAVGGI FSGTLCWLFE HYDAKKPFSE LVLEAKGLGI TEPDPRDDLS GRDMQRKLLI
LAREIGYDIE LDDIELESLV PTKLAEIPLD DFIKRMAELD GEMLQQYQAA AEQNKVLRYV
ASLDSEQGQL KAKVGIQWVD RSHPYANLTP GDNVFVIRSD FYQDNPLIIR GPGAGREVTA
AAVQSDLAQI CRDLLQE
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