| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0514 |
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| Symbol | |
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| ID | 4921859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 582488 |
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| End bp | 583894 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162043 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_001092645 |
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| Protein GI | 127511448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.829672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA CACTTTCTCT TACGGCGATG TTTGCTGCAG GGGTATTCGG CTTGGCCAGC
CTCAATGCCA TCGCCGAAAA CCCGCATAAG GAAGCCATTC AGGGGCCCTT TACCCAGGGC
TCTCAGGTGA CCGAGCAGTG TATCGAATGC CATGAAGATC ACGCCAAAGA CTTTATGAAG
TCTTCTCACT GGACCTGGGA GCTAGAACAG AAGCTGCCCG GACGCACGGT AAAACGGGGG
AAGAAGAACG CCATCAACAA CTTCTGTACT TCTATCGCCG GTAACGAGCC TAGATGTACC
AGCTGTCACG CAGGCTATGG CTGGAAAGAC AACAACTTCG ACTTTAGCGA CATGACCAAG
GTCGACTGCC TGGTGTGTCA CGACACCACA GGTACCTATG TCAAAGACCC TGCCGGTGCC
GGCGAGGCCC TGGCTAAGGT CAACCTGGAA CGTGTGGCAC AAAATGTCGG CATGCCGGTA
CGTGACAACT GTGGCTCCTG CCACTTCTAC GGTGGCGGCG GCGACGCGGT GAAGCATGGG
GATCTCGACT CCTCCATGGC CTATCCCGAC AAGGCCACCG ACGTGCACAT GGACAGCGAT
GGCAATGACT TCCAGTGCCA GACCTGTCAC ACCACCCAGC AGCACCAGAT CACCGGCAAT
GCCATGGGCG TATCGCCAGG CGGTGAGAAC GATATCGGCT GTGAAAACTG CCACGATAGC
GCGCCACACG CCAACAAGCG CCTCAACACC CATACGGCCA GCGTCGCCTG TCAGACCTGT
CACATTCCAT TCTTCGCCCG CAATGAGCCG ACCAAGATGA GCTGGGACTG GTCGACCGCG
GGTAGCGATC AAGAGGAAAC CGTGGACGAG TATGGCAAGC ACACCTTCAT GAAGAAGAAA
GGCAGCTTCG TCTGGGGCAA GATGGTCAAG CCTGAATACG CCTGGTACAA CGGCAAAGCC
GATGCCTACA TGGTGGGTGA CAAGATGGAT CCATCCAAGG TCACTAAGTT GACTGCACCA
CTGGGTGATA TCACAGACAA GACCGCCAAG ATCTACCCAT TCAAGGTGCA TCGCGGCAAG
CAGATCTACG ACAAGAAGCA GAACATTTTC GTTACCGCCA AAGTCTATGG CAAGGGCGGT
TACTGGAAAG AGTTCGACTG GGATAAGGCC GCCAAGCTCG GCATGGAGGC TAACCAGGCA
CTGGCCCAGC AAGGCATCAA GTACAGTGGT GAGCATGGCT TTGCCGAAAC CGAGATGTGG
TGGCGTATTA ACCACATGGT TTCGCCAAAA GATCAGGCGC TCAAGTGTAA CGACTGCCAC
AACAAGGGCA CACGTTTAGA TTGGCAAGCC TTAGGTTACG AAGGCGACCC AATGAAGAAC
AAGAAAGGCG CTAAACACGC CAAGTAA
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| Protein sequence | MKHTLSLTAM FAAGVFGLAS LNAIAENPHK EAIQGPFTQG SQVTEQCIEC HEDHAKDFMK
SSHWTWELEQ KLPGRTVKRG KKNAINNFCT SIAGNEPRCT SCHAGYGWKD NNFDFSDMTK
VDCLVCHDTT GTYVKDPAGA GEALAKVNLE RVAQNVGMPV RDNCGSCHFY GGGGDAVKHG
DLDSSMAYPD KATDVHMDSD GNDFQCQTCH TTQQHQITGN AMGVSPGGEN DIGCENCHDS
APHANKRLNT HTASVACQTC HIPFFARNEP TKMSWDWSTA GSDQEETVDE YGKHTFMKKK
GSFVWGKMVK PEYAWYNGKA DAYMVGDKMD PSKVTKLTAP LGDITDKTAK IYPFKVHRGK
QIYDKKQNIF VTAKVYGKGG YWKEFDWDKA AKLGMEANQA LAQQGIKYSG EHGFAETEMW
WRINHMVSPK DQALKCNDCH NKGTRLDWQA LGYEGDPMKN KKGAKHAK
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