| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0506 |
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| Symbol | |
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| ID | 4923517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 564571 |
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| End bp | 565488 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162035 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001092637 |
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| Protein GI | 127511440 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCATC TCAAAGATCT GCAACTGGCG ATCCGCATCG CCGACCTGCA CAGCATATCG
GCCGCCGCCC GCGAGCTGGG CATGACACCT GCTTCCGCCA GCGCCGCCCT GCAGCGTCTG
GAACATAAGC TCAACTGTCA GCTGTTCGCC CGCTCGACCC GCAACATGCA GCTCACCGAG
GAGGGCCAGG CCTTCATCGA CACCGGGCGT CAGGCCCTCA GCCTACTGCA AGGCGCCAGC
GACGCCCTGG CCGACAAGCG AGGCGAACTC AGGGGCGAGC TACGTATCGC CCTTCCCTCA
GATCTTGGCC GCAATCGGGT CAGAGCCTGG CTGGATGAGC TGACAGCCGA GGCCCCCGAG
CTGACCCTGA GGCTCTATTT CGGCGATCAG CTGGACGATC TCATCGCCCA GAATGTCCAC
CTGGCGCTGA GATACGGTGA GCTGCAGGAC TCCTCCCTGA TGCGTCGGCA GCTGGCGCGC
ATGCACAGGG TGACGGTGGC CTCCCCAGTC TACTTAGCGC GACATGGCCG CCCGAGTCAT
CCCCAGCAGC TAAGCCAGCA TAAGATCTTA TTGCTCAACC GCGGTAACAC CCCATGGCAC
AAGTGGCGTT TCGCCTACAA ACAACAGCCC CTAGAGGTCG AGCTAACGGG CAGCAAGAGT
TGCAACGATG GCGCCGTGAT AAAAGAGTGG GCCCTGGCGG GAGAAGGGAT CGCCTACAAG
AGCTGGTTCG ATGTGGCCCA GGAGGTCACA GAGGGCAGGC TTGAGCTGCT GCTGGTAGAC
TATCTGGCCG ACCCCATCCC CCTACAGCTC ACCTATCTAC AGACGGAATA CCCAAGCCAC
AAGGTCCGCA CCTGTATCGA GTTTCTTAAA GAGAAATGCC AGGCATTCGA CAGCCAATAT
CCGCTGCTCA GGCGCTAG
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| Protein sequence | MYHLKDLQLA IRIADLHSIS AAARELGMTP ASASAALQRL EHKLNCQLFA RSTRNMQLTE
EGQAFIDTGR QALSLLQGAS DALADKRGEL RGELRIALPS DLGRNRVRAW LDELTAEAPE
LTLRLYFGDQ LDDLIAQNVH LALRYGELQD SSLMRRQLAR MHRVTVASPV YLARHGRPSH
PQQLSQHKIL LLNRGNTPWH KWRFAYKQQP LEVELTGSKS CNDGAVIKEW ALAGEGIAYK
SWFDVAQEVT EGRLELLLVD YLADPIPLQL TYLQTEYPSH KVRTCIEFLK EKCQAFDSQY
PLLRR
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