Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0498 |
Symbol | |
ID | 4923729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 557009 |
End bp | 557638 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640162027 |
Product | flavoprotein oxygenase |
Protein accession | YP_001092629 |
Protein GI | 127511432 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAC AGGCGCGTTA TTACTATGAA CCAAGCAAGG GCCATGGGCT GGCGCACGAT CCGCTCAATG CCATCGTCGG GCCCAGGCCG ATCGGCTGGA TCGCCTCTCG CAGCCCCGAA GGCCATAGAA ATCTGGCTCC CTATAGCTTC TTCAACTGCT TCAACTACCA TCCGCCCATC ATAGGCTTCG CCAGCGTCGG CTATAAGGAC AGCCTGGCCA ACATATTGGC TACGGGCGAA TTTGTCTGGA ACCTGGCCAC CCGGCCGCTG GCCGAGAAGA TGAACCTCAC CTCGGCGGCC CTGCCAGCGG GCAGCGACGA GTTTGATTTT GCCGGGCTCA CGCCTGTGGC GGGTAGCGTT GTGGGGGTCG ACCGGGTGGC CGAGAGCCCG GTCAACTTCG AGTGCAGGCT GACCCAGTCG CTACAGCTGC AATCGGCCGC TGGCGATAAA ATTGAGACCT GGCTGGTGCT GGGCGAAGTG GTCGCCGTGC ATATCGACCC CAGCCTGATA GAAGATGGCA GCTACCAGAC CGCCAAGGCC AAGCCTATCC TCAGGGCCGG TGGCCCCTCG GCCTACTATG GCATCTCTGA GGCGCTGCGC TTCGACATGC AGCGACCCCA AGTGCCCTAA
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Protein sequence | MDTQARYYYE PSKGHGLAHD PLNAIVGPRP IGWIASRSPE GHRNLAPYSF FNCFNYHPPI IGFASVGYKD SLANILATGE FVWNLATRPL AEKMNLTSAA LPAGSDEFDF AGLTPVAGSV VGVDRVAESP VNFECRLTQS LQLQSAAGDK IETWLVLGEV VAVHIDPSLI EDGSYQTAKA KPILRAGGPS AYYGISEALR FDMQRPQVP
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