| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0497 |
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| Symbol | |
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| ID | 4923647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 555306 |
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| End bp | 557003 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162026 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_001092628 |
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| Protein GI | 127511431 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAG CAGTCAAAAA AAGCATTAGC GCTAAACCCT CTTTTCAGGA GATACAGACC
AACATCTTGG CGGGATTGAC CGTGGGGGTG ATTGCCCTGC CACTCTCTAT GGCACTGGCG
ATCGCCAGCG GCGTGCCGCC TCAGCACGGC CTCTACACGG CGATGATCGC CGGCATAGTG
ATCGCCCTGT GTGGCGGCTC TAAGGTCAAC ATCTCGGGGC CGACGGCGGC CTTCGTGGTG
ATCTTGCTGC CCATAGTGCA GCAGTTTGGT CTGGGGGGAC TCCTGCTGAG CGGCCTGATG
GCCGGGGTGA TACTGCTGTT GATGGGACTG GGTAAGCTGG GCAAGTTGAT CGAGATAGTG
CCTTATCCGG TGACCGTAGG CTTCACCGCC GGGATAGGCG TGGTGATCGC CACCTTTCAA
ATCAAAGACT TCTTCGGCCT CGAGGTGGCC GCTGGTGGCG AGCATTACCT GGAAAAGCTC
TCCTATATCC TCCAGGCGCT GACCAGCATC AGTTGGCAGG AGACGCTGAT CGGTGCCCTG
ACCCTGGCCG TGTTGCTGGC CTGGCCCAAG CTCAAGTCTA AGGTGCCGGC GCACCTGGCC
GCGCTCTTGG TGGGCGCACT CATCGCCTGG GTCATGACCC AGATGATCGG CGGTTTCTCG
GTGGCGACAA TCGGCAGCCG TTTTCACTAT GAGCTCGATG GCCTGCTGGG CAGCGGTATT
CCGCCCATCA TGCCAAGCTT CGAGTGGCCC TGGAATCTGC CGGGCGCCGA TGGTCAGCCC
ATAGGCATGA GTTTCGAGCT GGTGCGTGAG CTACTGCCCT CGGCCATCAC CATCGCCATC
CTGGGCGCGC TGGAATCCTT GCTGTGCGCG GTGGTGGCCG ATGGCATGTC GGGCAAGAAA
CACAACCCCA ACGATGAGCT GATCGGCCAG GGGCTGGGTA ACATCTTGGT GCCCCTGTTT
GGTGGGATCC CCGCGACGGC GGCTATCGCC CGCACTGCGG CCAACGTCAA GGCTGGGGGT
AGCATGCCGC TGGCCTCAGT GGTTCATGGT CTGTTTATTC TGGCGGGGAT CCTCCTGCTG
GCGCCGCTGC TGTCATACAT TCCTATGGCG TCCATGGCGG CGCTGCTGCT GGTGGTGGCC
TGGAACATGA GCGAGGCCAA ACACTTCGTC CGCACCCTCA AGGTGGCGCC GAGGGACGAT
GTGTTGATCT TGGTACTCTG TTTCGCCCTT ACCGTGTTGT TCGACATGAC GATTGCCGTG
GCGGTGGGCA TGGGGCTGGC GGCTATGTTG TTTATTCGCC GCAGCATTAG CCTGACCGAT
GCCAGGGCGG TGGAGACTAA CCATCAGGCC TATGAGGTGC CTGAGAGTGT GGTGGTGTAC
GACATCAATG GGCCGCTGTT TTTCGGCTCT GCCCACAAGG CGCTCAAGAC TATCGCCCTG
GTGCGTCCCG ACGTGAGGGT GGTGATTCTG GATATGTCCG AGGTGACTCT GCTGGATATG
AGCGCCATCG TCGCCATGGA GTCGATCGCC CAAGATCTGT CGGGCAAGCA GGTGGCGCTG
ATCATCAACA ACCTGCAGCC GCGCATGTTG CTCAAGCTCA GGCGGGCGGG GATCCGCAAG
CGCCGTGGTC AGGTGGAGTA TGCTCGCACC ATGGACGACA GCTTCGCCCT GGCCCAGCGG
ATGACGGCGC AGGCATAA
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| Protein sequence | MFSAVKKSIS AKPSFQEIQT NILAGLTVGV IALPLSMALA IASGVPPQHG LYTAMIAGIV
IALCGGSKVN ISGPTAAFVV ILLPIVQQFG LGGLLLSGLM AGVILLLMGL GKLGKLIEIV
PYPVTVGFTA GIGVVIATFQ IKDFFGLEVA AGGEHYLEKL SYILQALTSI SWQETLIGAL
TLAVLLAWPK LKSKVPAHLA ALLVGALIAW VMTQMIGGFS VATIGSRFHY ELDGLLGSGI
PPIMPSFEWP WNLPGADGQP IGMSFELVRE LLPSAITIAI LGALESLLCA VVADGMSGKK
HNPNDELIGQ GLGNILVPLF GGIPATAAIA RTAANVKAGG SMPLASVVHG LFILAGILLL
APLLSYIPMA SMAALLLVVA WNMSEAKHFV RTLKVAPRDD VLILVLCFAL TVLFDMTIAV
AVGMGLAAML FIRRSISLTD ARAVETNHQA YEVPESVVVY DINGPLFFGS AHKALKTIAL
VRPDVRVVIL DMSEVTLLDM SAIVAMESIA QDLSGKQVAL IINNLQPRML LKLRRAGIRK
RRGQVEYART MDDSFALAQR MTAQA
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