| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0492 |
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| Symbol | |
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| ID | 4923440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 548543 |
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| End bp | 550135 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162021 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001092623 |
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| Protein GI | 127511426 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATA AAATTGCGAA AAGGATCGCT TCGCTGAGCG CCCTGCAGTG GAGTCTGCTG
ACCGGCCTGC CACTAGTGCC GATAGCCTAC CTCTTGATAC GCCAAGGCGC CTGGGGCTGG
CTGGCCCTGT TAGTTATCGA TTACCTATTT ATCCTCTCTG TGCTGCTAGC CCTGAATAGC
ATGTTCGGCA GGCTGCGCAG CGCCGCCATC CATCTCTCCG AGGGCGATCT CAGGGTAAGA
CTCGACACCC AGGAGGCCCT CGGCGGCCCG CTGTTTAAGG CCTTCAATCA GATAGGCGAA
GATGTGTCAC GTACCGTCTT CTCCCTGAGC AAGTCAGCCC AGCAGCTGGT CAGGGTGGCC
GATACAGTTC AGGCCGACTC CCAAGTCTCC AAAACCGGCG CCCTCAGACA GAAGGACGAT
GTCGAAGAGG CCAAACAGAT AGTCTCCAAG CTGTTTGAGA CCACCGCCGA AGTCTCCTCC
TTCTGCGAGT CCACCTCACA GCTGGCCAGC GAGTCCAAGC GTCAGGCGGA TCGTGGTAAG
CAGGAGATGC GCTCCCTCGA GACGGCGCTT GAAGATGTTG GCGAACAGTT TGCCGCCTCG
GACCAGAACT TCGAGCAGCT CAAGCAGGAG AGCCTGCAGA TAGGTCAGGT GGTAGAAACC
ATTAAGGGGA TTGCCGAGCA GACCAACCTA CTGGCGCTCA ATGCCGCCAT CGAGAGTGCC
CGCGCCGGCG AGCTGGGCCG AGGCTTCGCC GTGGTCGCCG ACGAGGTTCG CTCTCTGGCG
CTACGCACCC AGGTGGCCAC CGAAGATATC AACAACAAGA TAGTTAACCT GCAGACCCAG
ATAAATGATG CCATCGCGGC GATGCAGAAA AACCGCCAGA GCGTGCTACA CTCCCAGAGC
GTGGCCAACG AGGCCGAATC CCATTTCGAA GAGTTGGTGA GCCAGATAGA CGCCATCGAC
GCCCTGGGCC AGGAGATCGC CGTCGCCTCT CAGCATCAGG TAGAGCAGAC TCAGATGCTG
GAAACCTGTC TGGTGGAGGT CGACAAGGTA TCCGATGAAA ACGTCAAGGC TACCCAGGAG
ACACTGCTGG CCAGCATCAC GGTGCGTAAT TTAGCGGGTG AGATCGATTC CCTGCTTCAC
CGCTTTGCCA CCGACAGCGA GCAGATCGGC CGAGAGGATA CACGCCGCGA CAAGCTGATC
GAATGGAGCG ATGCCCTGGA TCTCAACCTC GCCGAGATCA ACCGTCAGCA CAAGACCCTG
GTACACCTGA TCAACGAGCT CTACTATCTG CTCAACAACA ACTATGGCCT GGCCTCCATC
AAGCGAGTGG TACAGGGGCT GATCGACTAC ACGGCCAATC ACTTCAAATA TGAAGAGACG
CTGTTCGAGC AGTTTGGCTA CCCTCAGGAT AAGCAGCATA CCGACTCTCA CCACCAGCTG
GTCGGCAAGG TGCTGGCGTT TCAGCGCCGG GTCGAACAGG GCGAAGATAT TGGCGATGAG
TTGATGGCAT TTCTGAAGAG CTGGCTCAGC CAGCACATCC AGAAGGAGGA TAAGGCCTAT
GTGGACTGCT TCAAGCACAA TGGCATGAAC TAG
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| Protein sequence | MIDKIAKRIA SLSALQWSLL TGLPLVPIAY LLIRQGAWGW LALLVIDYLF ILSVLLALNS
MFGRLRSAAI HLSEGDLRVR LDTQEALGGP LFKAFNQIGE DVSRTVFSLS KSAQQLVRVA
DTVQADSQVS KTGALRQKDD VEEAKQIVSK LFETTAEVSS FCESTSQLAS ESKRQADRGK
QEMRSLETAL EDVGEQFAAS DQNFEQLKQE SLQIGQVVET IKGIAEQTNL LALNAAIESA
RAGELGRGFA VVADEVRSLA LRTQVATEDI NNKIVNLQTQ INDAIAAMQK NRQSVLHSQS
VANEAESHFE ELVSQIDAID ALGQEIAVAS QHQVEQTQML ETCLVEVDKV SDENVKATQE
TLLASITVRN LAGEIDSLLH RFATDSEQIG REDTRRDKLI EWSDALDLNL AEINRQHKTL
VHLINELYYL LNNNYGLASI KRVVQGLIDY TANHFKYEET LFEQFGYPQD KQHTDSHHQL
VGKVLAFQRR VEQGEDIGDE LMAFLKSWLS QHIQKEDKAY VDCFKHNGMN
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