Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0476 |
Symbol | |
ID | 4921683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 533870 |
End bp | 534667 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640162005 |
Product | hypothetical protein |
Protein accession | YP_001092607 |
Protein GI | 127511410 |
COG category | [S] Function unknown |
COG ID | [COG1432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACG TAGCGAAAAT AGCGGTGTTT ATCGACGCAG ATAACGCACC GGCAAGAAAG TTTGACGTGA TACTGGCTGA GCTAGCCAAA CATGGCGTGG TGAGTATTCG CAAAGCCTAC GGCAACTGGA AAAGCCCAGG CCTGAAGCAC TGGGAAGACA TACTGCACGA ATATGCCATT CAACCTATTC AACAGTTCGA CCTGACCAAA GGAAAGAACG CCACAGATAT CGCACTGGTA ATCGATGCCA TGGACATCTT ATACACCAAA GATATAGATA TCATGTGCCT CATCTCCTCT GACTGCGACT TCACTCCCTT AGTCACCAGA GTGCTCTCAG ACGGCAAAAA GGTATTCGGC TTTGGCGAAC GTAAAGCCCC CACCGCTTTC GTCAACAGCT GCTCTCGCTT CCTCTACCTA GACGCAGAAC CCGAAGTTGA AACCGAAGTA GAAGTGCCTA TAGAGAAAGT AACTGAGTCA GCAACAGATA AAGAAGCAAA AACCACCACG CCAACCACAA AAGCCAGTGT TCCACGCAAA CAAAACCTTA AAGGTGACAC CAAGTTAATT CACCTACTGC GACAGGCAAT TGAGGCAACA GAAGAAGATG ACGGCTGGTC ACGCCTCGGC CCCATCGGCT CTCACATTTC GAACCACAGC TCATTCGACC AAAGAAACTA TGGCTTCAAG AAACTCAGCG ATCTCTTCGC CGCCATAGAC CTATTCGAGA TGCGAAAAAC CAACGGTTCA GTCATGTGGA TCAGAGAGAG CAAACGAGCC AAGAAGAATG GGAAGTAA
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Protein sequence | MQDVAKIAVF IDADNAPARK FDVILAELAK HGVVSIRKAY GNWKSPGLKH WEDILHEYAI QPIQQFDLTK GKNATDIALV IDAMDILYTK DIDIMCLISS DCDFTPLVTR VLSDGKKVFG FGERKAPTAF VNSCSRFLYL DAEPEVETEV EVPIEKVTES ATDKEAKTTT PTTKASVPRK QNLKGDTKLI HLLRQAIEAT EEDDGWSRLG PIGSHISNHS SFDQRNYGFK KLSDLFAAID LFEMRKTNGS VMWIRESKRA KKNGK
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