| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0472 |
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| Symbol | groEL |
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| ID | 4922412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 529453 |
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| End bp | 531102 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162001 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001092603 |
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| Protein GI | 127511406 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTTTT ATTTGGCAAT GACGCTCGCG TAAAAATGCT TGCGGGCGTA
AACGTACTGG CTAACGCAGT TAAAGTTACT CTAGGCCCTA AAGGCCGTAA CGTAGTTCTA
GACAAGAGCT TCGGCGCGCC GCTGATCACC AAAGACGGTG TATCGGTAGC TAAAGAGATC
GAACTGGAAG ATAAGTTCGA AAACATGGGC GCGCAGATGG TGAAAGAAGT TGCTTCTAAA
GCCAACGACG CCGCCGGTGA CGGTACCACT ACTGCAACCG TACTGGCACA AGCCATCGTA
ACCGAAGGCC TGAAAGCCGT TGCCGCTGGC ATGAACCCAA TGGATCTTAA GCGCGGTATC
GACAAGGCGG TTGTAGCTGC CGTTGCCGAG CTGAAAACCC TGTCTCAAGA GTGTAGCGAC
ACTAAGGCTA TCGCTCAGGT AGGTACCATC TCTGCTAACT CTGACGAGTC AATCGGCGAA
ATCATCGCAA CTGCGATGGA AAAAGTTGGT AAAGAAGGCG TGATCACAGT TGAAGAAGGT
CAGGCCCTAG AGAACGAGCT GGACGTGGTT GAAGGTATGC AGTTCGACCG TGGTTACCTG
TCTCCATACT TCATCAACAA GCCAGAAACC GGCAGCGTTG AACTTGAAAA CCCATACATC
CTATTGGTTG ACAAGAAGAT CTCTAACATC CGTGAGCTAC TGCCTATCCT TGAAGGTCTG
GCGAAAACCG GTAAGCCACT GATGATCATC GCAGAAGACG TTGAAGGCGA AGCCCTGGCG
ACTCTGGTTG TGAACAACAT GCGCGGCATC GTTAAAGTGG CTGCGGTTAA GGCACCTGGT
TTCGGTGACC GTCGTAAGGC GATGCTACAA GATATCGCTA TCCTGACTGG CGGTACTGTG
ATTGCCGAAG AGATCGGTCT TGAGCTTGAA AAAGCGACTC TGGAAGACCT AGGTACTGCT
AAGCGCGTGG TTATCACCAA AGATGACACT ACCATCATCG ACGGTACCGG CGAGCAAGAG
CAGATCTCTG CCCGTGTTGC CCAGATCAAG ATCCAGGCAG AAGAGTCTAC TTCAGACTAC
GACCGTGAAA AACTACAAGA GCGTATGGCT AAGCTGGCCG GCGGTGTTGC AGTGATCAAA
GTCGGTGCCG CTACCGAAGT TGAAATGAAA GAGAAGAAGG CTCGCGTAGA AGACGCGCTG
CACGCGACTC GCGCCGCCGT TGAAGAAGGT GTGGTTGCCG GTGGTGGTGT TGCCCTGATC
CGCGTTGCTT CTAAGATTGG TGAGCTGGAC GTGGCTAACG AAGACCAGAA GCACGGTGTG
ACTATCGCAC TGCGCGCCAT GGAAGCGCCT CTACGTCAAA TCGCGACCAA CGCAGGTGAA
GAAGCCTCAG TTGTAGCGAA CAATGTTAAG AACGGCTCTG GTAACTATGG TTACAACGCC
GGTAGCGATG TGTATGGTGA CATGCTAGAG ATGGGTATTC TTGACCCAAC TAAGGTGACT
CGTAGCGCGC TACAGTTCGC TTCATCTATC GCAGGTCTGA TGATCACTAC CGAAGCTATG
GTGGGTGATG TACCGCAAGA AGCTGGTGCT GGCGATATGG GCGGCATGGG CGGCGGTATG
GGTGGTATGG GCGGCATGGG CATGATGTAA
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| Protein sequence | MAAKEVLFGN DARVKMLAGV NVLANAVKVT LGPKGRNVVL DKSFGAPLIT KDGVSVAKEI
ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQAIV TEGLKAVAAG MNPMDLKRGI
DKAVVAAVAE LKTLSQECSD TKAIAQVGTI SANSDESIGE IIATAMEKVG KEGVITVEEG
QALENELDVV EGMQFDRGYL SPYFINKPET GSVELENPYI LLVDKKISNI RELLPILEGL
AKTGKPLMII AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAILTGGTV
IAEEIGLELE KATLEDLGTA KRVVITKDDT TIIDGTGEQE QISARVAQIK IQAEESTSDY
DREKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVAGGGVALI
RVASKIGELD VANEDQKHGV TIALRAMEAP LRQIATNAGE EASVVANNVK NGSGNYGYNA
GSDVYGDMLE MGILDPTKVT RSALQFASSI AGLMITTEAM VGDVPQEAGA GDMGGMGGGM
GGMGGMGMM
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