Gene Shew_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0465 
Symbol 
ID4922041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp520912 
End bp521322 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content58% 
IMG OID640161994 
Producthypothetical protein 
Protein accessionYP_001092596 
Protein GI127511399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGCTC ATCACTCCAT CGACAGGCGC CTGTTACTGG TGGCAGCATT GGCCGCCACG 
GCGCTACTGG GCTGTGAGCG GCCGGTGAGC TTCTCATCCG AAGTACAGCC CATACTCAAC
GCCTCCTGCA TCAGCTGTCA TTCGGGTGCA GGCGAAGGCA TGGCAAAAAC CCATCTGGCA
CTGGATAGCT ATCAGGGCGT GATGCGCGGT ACCCAGCTTG GCCCCGTCGT GGTTCCCGGC
AGTTCCGCCT CCAGCACCCT CTACCTGGCG ATCGACCATA AGGTCGATAG CAAGATCCAG
ATGCCGCCCC ACCACAGTGA TAAATTTGCG CAAGGCGAAG GAAAGCCCCT CAGCAGCGAG
CAGATCGCCC TCATCAAGCG TTGGATAGAT GAAGGCGCGA AACAGAACTA A
 
Protein sequence
MYAHHSIDRR LLLVAALAAT ALLGCERPVS FSSEVQPILN ASCISCHSGA GEGMAKTHLA 
LDSYQGVMRG TQLGPVVVPG SSASSTLYLA IDHKVDSKIQ MPPHHSDKFA QGEGKPLSSE
QIALIKRWID EGAKQN