| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0460 |
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| Symbol | |
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| ID | 4921856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 516184 |
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| End bp | 518583 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640161989 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092591 |
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| Protein GI | 127511394 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCCT CTACACTCGC GCTGGCCCTT GCCCTCATTC TGGTCCCGAC TGGCCCCCTG
CTCGCCGTCG AAAATAGCGC TAAGGTGATC AAGAGCAGCC AGGCCGCTAA TGGCTTTATC
AACCTCTTCT ATCAGCAAGG CTCGGGCGAT CTCTACCTGG AGGCGACCCG CCTCAATCAG
CCTTTCCTGC TGGTGACCAG CCTGCCCCAT GGCGTGGGCT CTAACGATAT CGGCCTGGAT
CGCGGCCAGC TGGGGATGAC CCGCCTGGTG CAGTTTGAGC GCCACGGCCC CTATCTCATT
CTGAAACAGC TCAACACCCG CTACCGGGCG ACCACAGATA ACGGCGCCGA GCAGCGGGCA
GTCAAAGAGG CCTTCGCCGA ATCTGTGCTC TGGCGCGGCA AGCTGCTGGA GGGCAAGCAG
GCGCTGGTAT CGATTAACGA CCTGGTACTG CGAGACCTGC ACGGTATAGC CGACACCCTG
GAGCAGACCA AGCAGGGGCA TTATCAGCTG GATAAGGAGA CCTCGCTCAT CCTGCCTCAG
GGGGTGAAAT CCTTCGAGCG TAACAGCGAT GTAGACGTAC TGCTCACCTT CAAGGGCGCC
AAGGCCGGGC CTCAGGTGGC CGAGGTCACC CCAGATGGCA AACAGATGTC GCTGCGGATG
CGCTACTCCT TCGTCGAGCT GCCGGACGAC AACTACCAGC CCAGGTCCTA TCACCCCAAC
AGTGGCTACC TGTCTGACGA GTATCTGGAT TACGGCGCGC CAATCGACAA AGACATAGTG
CAGCGCCATC TGCTGCGTCA TCGCCTGCAG AAGGTCACCC CGGGCGATGC GCCCAGCGAG
GTGGTGAAAC CTATCATCTA CTATCTGGAT CCCGGTGTGC CCGAGCCTAT TCGTAGCGCC
CTGCTAGAGG GCGCTCGCTG GTGGGAGACC GCCTTCAACG AGGCGGGCTT TATCAACGGC
TTCAAGGTAG AGCTGCTGCC GGAAGATGCC GACCCTCAGG ACATTCGCTA CAACGTGATC
CAGTGGGTAC ACAGGGCGAC CCGCGGCTGG TCTTATGGCA GCGCCATCGC CGATCCCCGC
ACAGGTGAGA TCATCAAGGG CCATGTAACC TTGGGCAGTC AGCGCGTCAG GCAAGATCAC
CTCATCGCCC GCGGCCTCAC CGCAGGCTGG CAAGACAGGG AGGCGGCCGC CCAGGCGGTG
ACGGAGCTCT CCCTGGCGCG TATTCGCCAG CTGTCGGCCC ATGAGGTGGG CCACACCTTA
GGCCTGGATC ATAACTTTGC GGCGTCGAGT AACGATAACG CCTCTGTGAT GGATTACCCG
CACCCCAAGG CGACCCTCAA GGGCGACAAG ATAGATATCT CTGCCCCCTA TGATGAGGGC
GTCGGTGCCT GGGACAAGTT TACCGTGGCC TATGGCTATG GTCAGTTTAG CCAGGAAGAT
CAACAGGCTA AGTTGACTGA GCTGATGCAG GCGGTGGAGC GTCAGGGGCT AAGATATATC
GGCGAAGCAG ATTCGCGCCG CGCCGGTGCC AGCCATGCCT ACGCCAGCCT GTGGGACAAT
GGCCAGGATC CTGTGGCCGA GCTGAGCCGC CTGGCCAAGG TGCGTGAAGT GGCCATCGAC
GGCTTTAGCG ATGCCGCCTT GCTGAAAGGC CAGCCCTATG GCGAGCTGCG CGACGCCTTC
GTCCCCATCT ATCTGCTAAC CCGCTATCAG ATAGAAGCCG CGGCCAAGTT TATCGGCGGC
ACCGACTATA CCTATTCCAC CCAGGAGGGC GGGCGTAGCT GGCATTATAT GGCGCCTGAG
CTGCAAAAGA ATGCCCTGGA GGGCCTGCTG CAGGGCCTGA GCGTGGATGC CCTGGCGCTG
CCAACCAAGG TGACCGATGC TCTGGTGCCG AAGTCGGGCA ACTATGGCGC CACCCGCGAA
AGCTTCGATA GCGCCACCGG CGTGGTGATC GACCCTATCG GCATGGCCGA GGTGCTGAGT
CGTCACACCT GTGGGCAGCT GCTGCAGCCG ATGCGACTAA ATCGCGTCAA TCAGGGCTAC
TTTGCCGACA AGGAGCAGCT CTCCGTCGTC ACTCTGGTAA ACAAGCTGCT GGCCAAAACA
GTGTTTGCCG ATGCCCCTAA CGGCCCAAGC CAGGGGGTAT GGATGCGGGT CAACGCCGTG
GTGCTCGACG CCCTGTTGGC TAGCTACCAC GACGGGGCGA GTTCGCCCGA GGTGAAGGCG
CAGCTGGCGG GCCGTCTGGC TTTTGCTCAG AAGCAGCTCA GCCGACTGGT GAAGCGCAGC
AGCGACTATG AGGCGGCCCA CTATCAGTGG CTGCTCGATG GCCTGGAGAA GGGGCTGAAG
GATAGCAAGT ACAAGCTGAT CCACAAGCCG TTGGCCATGC CGCCGGGTTC GCCGATTTAA
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| Protein sequence | MRPSTLALAL ALILVPTGPL LAVENSAKVI KSSQAANGFI NLFYQQGSGD LYLEATRLNQ
PFLLVTSLPH GVGSNDIGLD RGQLGMTRLV QFERHGPYLI LKQLNTRYRA TTDNGAEQRA
VKEAFAESVL WRGKLLEGKQ ALVSINDLVL RDLHGIADTL EQTKQGHYQL DKETSLILPQ
GVKSFERNSD VDVLLTFKGA KAGPQVAEVT PDGKQMSLRM RYSFVELPDD NYQPRSYHPN
SGYLSDEYLD YGAPIDKDIV QRHLLRHRLQ KVTPGDAPSE VVKPIIYYLD PGVPEPIRSA
LLEGARWWET AFNEAGFING FKVELLPEDA DPQDIRYNVI QWVHRATRGW SYGSAIADPR
TGEIIKGHVT LGSQRVRQDH LIARGLTAGW QDREAAAQAV TELSLARIRQ LSAHEVGHTL
GLDHNFAASS NDNASVMDYP HPKATLKGDK IDISAPYDEG VGAWDKFTVA YGYGQFSQED
QQAKLTELMQ AVERQGLRYI GEADSRRAGA SHAYASLWDN GQDPVAELSR LAKVREVAID
GFSDAALLKG QPYGELRDAF VPIYLLTRYQ IEAAAKFIGG TDYTYSTQEG GRSWHYMAPE
LQKNALEGLL QGLSVDALAL PTKVTDALVP KSGNYGATRE SFDSATGVVI DPIGMAEVLS
RHTCGQLLQP MRLNRVNQGY FADKEQLSVV TLVNKLLAKT VFADAPNGPS QGVWMRVNAV
VLDALLASYH DGASSPEVKA QLAGRLAFAQ KQLSRLVKRS SDYEAAHYQW LLDGLEKGLK
DSKYKLIHKP LAMPPGSPI
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