| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0448 |
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| Symbol | |
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| ID | 4921050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 499187 |
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| End bp | 500098 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640161977 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001092579 |
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| Protein GI | 127511382 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.158105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCATCA ATTCTAACTA CTTAAAAGCT GGCGTTGCGG CGCTAGCGCT GAGCTTTGCC
TGTGGTGCAC AGGCGAAATT GAATATCTTC GCCTGCGAGC CTGAATATGC CGCCTTGGCC
AAGGAGCTGG CACCGGATGC CAAGATCTAT GCCGCGACCA CGGCGATGCA AGACCCGCAT
CAGGTGCAGG CCAGACCCAG CCTGATCGCC AAGATGCGCC AGGCAGATCT GGCGGTCTGC
GCCGGCGCCG ATCTCGAGGT GGGCTGGCTG CCCATGTTGC AGATGAAGTC GGCCAACGCC
CAGGTGCGCT CGACTGATAA GGGGCTATTC TATGCCGCCG AGCATACTCA GACCTTGGAT
AAGCTGGCTC AGGTGGATCG CAGCATGGGC GATGTCCATG CCCAGGGCAA TCCGCACCTG
CACTTCGACC CAGAGCGTCT GCTGGAGGTG GCTAAGGCGC TGTCGGCCAA GATGGTGTCG
TTGGATCCAG ATAATCGCGC GGCCTACGAA TCAGCCCTGG CCGATTTCAG CCAGCGTTGG
CAGGCGGCGA TAGCTGGTTG GCAGTCACAG GCGGCGCCGC TTAAGGGCAA GAAGGTGATC
GCCTATCACA CCAGCTTCCG CTACCTGTTT AACTGGTTGG GCATGGAGCA GGTGGGGGAT
CTCGAGCCTA AGCCTGGCCT GCCGCCAAGC ACGGGGCACC TGGCCAGCCT GCAGGGGCGC
GCCGGCCAGG GCGATGTGAT GGCGATTATT GTCGCCTCCT ATCAGGATGA GCGCGGCGCC
AACTGGCTCG GTGAGCGCAC CGGCTTGCCC GTGGTGAATC TGCCCATGTC GGTCGGTGGT
AACGATGATG CCCAAAACCT CTTTGGCCTG TACGACAGCG TTATCCACTT GTTGCTGGGC
GTGAATCGCT AG
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| Protein sequence | MRINSNYLKA GVAALALSFA CGAQAKLNIF ACEPEYAALA KELAPDAKIY AATTAMQDPH
QVQARPSLIA KMRQADLAVC AGADLEVGWL PMLQMKSANA QVRSTDKGLF YAAEHTQTLD
KLAQVDRSMG DVHAQGNPHL HFDPERLLEV AKALSAKMVS LDPDNRAAYE SALADFSQRW
QAAIAGWQSQ AAPLKGKKVI AYHTSFRYLF NWLGMEQVGD LEPKPGLPPS TGHLASLQGR
AGQGDVMAII VASYQDERGA NWLGERTGLP VVNLPMSVGG NDDAQNLFGL YDSVIHLLLG
VNR
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