| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0443 |
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| Symbol | |
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| ID | 4920697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 493192 |
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| End bp | 494886 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161972 |
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| Product | formate--tetrahydrofolate ligase |
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| Protein accession | YP_001092574 |
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| Protein GI | 127511377 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2759] Formyltetrahydrofolate synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.507159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTG ACATCGAAAT TTCACGCCAA GCCAGCTTAC AACCCATAGA AAGCATAGCT
ACTGCTTTCG GGATCTTGCC CCACGAATTA AGCCCTTACG GCAGAACCAA GGCCAAGGTC
GATCTGGCTA TCACCAACCG AATTAAAGAT AACAAACATG GTAAGTTAGT GATAGTCACG
GCGGTAACGC CGACTCCCTT CGGCGAAGGC AAGACAGTGA CCAGTATCGG CCTGACCCAG
GGCTTACAGG CGATCGGCAA GAAGAGCTGC GCCTGTATCC GTCAACCCAG CATGGGACCA
GTGTTTGGCA TCAAGGGTGG CGCCGCCGGT GGTGGCCTGG CCCAGGTGGT GCCCATGGAA
GATCTCAACC TGCATCTGAC CGGCGACATA CACGCGGTGA CCAGTGCCCA TAACTTGGCG
GCCGCGGCCA TTGATGCCCG CCTCTATCAT GAACAGCGTC TGGGCTGTGA GGCCTTTCGC
GAACAATCTG GGCTAGCGCC CTTAGATATC GATCCCGAGA AGATCTTATG GCGCCGGGTA
GTAGATCAGA ATGAGCGCAG CCTGCGCACC ATCACGGTCG GCCTTGGCGA GGTTAACGGC
CCAGTGCATC AGGGCGGCTT CGATATCAGC GCCGCCTCCG AGTTGATGGC GATTCTAGCA
CTGAGCCGGG ATCTCAAGGA CCTGCGTGCC CGCATCGGTC GTATCGTGTT GGCGCAGAAC
AAACAGGGCG ACTACATCAG CGCCGAAGAT CTTGGTGTGG CCGGCGCCAT GACGGCCATA
ATGAGTCAGG CCATCTCGCC GACCCTGATG CAGACCCTAA GTGGTGCCCC TTGTCTGATC
CATGCCGGCC CCTTCGCTAA CATCGCCCAT GGTAACTCGT CGATCATCGC CGACGATATC
GCCCTCAGAC TAGCAGATAT CGTGGTGACC GAGGGGGGCT TCGGCTCAGA TATGGGCTTC
GAGAAATTTT GTAATATCAA GACCCGTCAG TCGGGTAATG CGCCGGATGC GGCGGTATTG
GTGGTGACGG TCAAGGCGCT TAAGTCTCAT AATCCTGACG CAGGTAGCGA GATGGATAAG
CTCGCCGCCG GCTATGCCAA CCTCAGCTGG CACATCAGCA ACGTGGCCAA GTATGGCCTG
CCGCTGGTGG TGGCCATCAA CCGCTTCGCC GAGGATACCC AGGAGGAGCT AGAGTGGCTC
AAGGCCCGCG TGCTGCAAGA GGGGGTATTT GCCTGCGAAG TCTGCGAAGC CTTTACTCAG
GGGGCCGAGG GCGCGATGGC GCTTGCTAGG GCGGTGGTGC GGGCCACCGA GCAGCCGAGT
CAGTTCCGTT ATCTCTATGA GACCAAGCAG TCTATCGAGG CCAAGCTGCT GACCATCGCC
GAGGCGGGCT ATGGCGCAAA TGGCATCAGC TTATCCGACA CGGCCAAGGC TCAGCTGGCG
CAGCTGCAAC GCCAAGGATT TGATAAGCTG GCGCTCTGTA TCGCCAAGAC GCCGATGTCG
GTCAGCCATG ATCCTAAACT CAAAGGGGCG CCACAAGGGT TTGAGCTGCC CATCGCCGAG
CTGAAACTCA ATGCCGGTGC CGGCTTTATC ACTGCGCTGG TGGGTAAGGT GATGACGATG
CCAGGACTTG GGATACGTCC CGGTTACCTC AATATAGATA TCGATGAGCG AGGCGAGATC
ACCGGGCTGG CTTAA
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| Protein sequence | MLTDIEISRQ ASLQPIESIA TAFGILPHEL SPYGRTKAKV DLAITNRIKD NKHGKLVIVT
AVTPTPFGEG KTVTSIGLTQ GLQAIGKKSC ACIRQPSMGP VFGIKGGAAG GGLAQVVPME
DLNLHLTGDI HAVTSAHNLA AAAIDARLYH EQRLGCEAFR EQSGLAPLDI DPEKILWRRV
VDQNERSLRT ITVGLGEVNG PVHQGGFDIS AASELMAILA LSRDLKDLRA RIGRIVLAQN
KQGDYISAED LGVAGAMTAI MSQAISPTLM QTLSGAPCLI HAGPFANIAH GNSSIIADDI
ALRLADIVVT EGGFGSDMGF EKFCNIKTRQ SGNAPDAAVL VVTVKALKSH NPDAGSEMDK
LAAGYANLSW HISNVAKYGL PLVVAINRFA EDTQEELEWL KARVLQEGVF ACEVCEAFTQ
GAEGAMALAR AVVRATEQPS QFRYLYETKQ SIEAKLLTIA EAGYGANGIS LSDTAKAQLA
QLQRQGFDKL ALCIAKTPMS VSHDPKLKGA PQGFELPIAE LKLNAGAGFI TALVGKVMTM
PGLGIRPGYL NIDIDERGEI TGLA
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