| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0438 |
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| Symbol | |
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| ID | 4924205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 488537 |
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| End bp | 489421 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161967 |
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| Product | GumN family protein |
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| Protein accession | YP_001092569 |
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| Protein GI | 127511372 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.677318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA GTCGACCGCG TTTATTAACC ATAGGGATTT TACTACTGAC AGGGATCATG
TCACTCAGCG CGATGGCCGC CGGTGATGAC AAGCCGCCCT TCTATAAGAT CAGTTATCAA
GGCAAGCAGA CCTTTCTGTT GGGATCGATT CATATCGGCC AGGCCGGTTT TTACCCCATG
GCGGAGCAGA TCGAAGTGGC CTTTGCCAAG GCAGGCGCCC TGGCGGTCGA GGCCGATACT
AACAAGGCGG ATATCATGGG GCTGATCCGT AAGTATGGTT TGGCTCAGGT GGCCGCCGAT
GCCAAGACCC AGGCACGTCT TGAAGAATAC TGCCGTACCC GCAGTGAGAT CTGCACGCCC
ATGCAGCCCT ACGCACCTTG GATGCAGGCG ATGCAGTTTA GCGTGATGCG TTTCGCCTCT
TTAGGTTACC AGGCCCAGTG GGGCGTGGAT CAAATGCTGC TGAGCAAGAA CGGCCAGCGC
CCTGTGATCG AGCTTGAGAG CACAGAGTAT CAGTTTAAGC TGATGGCCTC TTTCAGCCCG
CAGATGCAGT GGGAGATGGT GCTCGAGGCG ATAGATGCGC CGGACGAGGA GATGGTACAG
CTTATCAAGG CCTGGCGCAG TGGCGATGAG GCGGGGCTCG ATGCCTTGAT GCAGGGGCAG
ATGCTGCACG ATGGCGATAA GGAGCTTATC GACAAGATGC TGTGGCAACG CAACGAGCAG
ATGACGGCCA AGATCAGATC CTTGATGATG CAACAAGATG GCCCATCGCC ACTGTTTGTG
GTGGTTGGCG CAGGTCATGT GGTCGGGGAT AAGGGGATTC CCGCCAAGTT TGCAGGTGTA
GAAGGAGCCA AGGTACAAAA CTGCTGGCAG ACGGCCTGTA ACTAA
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| Protein sequence | MATSRPRLLT IGILLLTGIM SLSAMAAGDD KPPFYKISYQ GKQTFLLGSI HIGQAGFYPM
AEQIEVAFAK AGALAVEADT NKADIMGLIR KYGLAQVAAD AKTQARLEEY CRTRSEICTP
MQPYAPWMQA MQFSVMRFAS LGYQAQWGVD QMLLSKNGQR PVIELESTEY QFKLMASFSP
QMQWEMVLEA IDAPDEEMVQ LIKAWRSGDE AGLDALMQGQ MLHDGDKELI DKMLWQRNEQ
MTAKIRSLMM QQDGPSPLFV VVGAGHVVGD KGIPAKFAGV EGAKVQNCWQ TACN
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