Gene Shew_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0435 
Symbol 
ID4923081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp485735 
End bp486256 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content53% 
IMG OID640161964 
Producthypothetical protein 
Protein accessionYP_001092566 
Protein GI127511369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC AATCTCTACT CTTGGTGGGA GCACTGGTGT CACTCAACCT TGCCGCCGAA 
GAAGCCAAAG AGAATCCAGT CACAGAGGCC GGGGTGGTTA AGATCACTTG GCAGGATACG
GATAACTATC GCGACGTGAA GGCTGTGGGT GACATTCAGT TTCGCTATGA GTTGCGTGTG
TTCGACACCC TGACCAAGAA CCTCAACAAG GCCGCCGAGA AGACGCTTAA GCCTAATCAG
AAGCTGGAGT TGGTGGTGAC AGACGTGGAT CTGGCCGGTG ATGTGCGCCC CACCTTTGGC
GCGACCCCTA ACGACATTCG TCTGATCGAA GATATCTATC CGCCACGCAT GACCTTTAGT
TACCAGGTGC TCGACGGTGA TAATGTGGTG ATCGCAGGTG ATGAGAAGCT CAGAGACATG
AGCTTCATGC ACACCACTGG CGTGATGAAC GACAAGCCCC TGAGACACGA GTCTAAGATG
CTGAGCGATT GGCTGAAGAA GACGGTGCAG CCCAAACTCT AA
 
Protein sequence
MKFQSLLLVG ALVSLNLAAE EAKENPVTEA GVVKITWQDT DNYRDVKAVG DIQFRYELRV 
FDTLTKNLNK AAEKTLKPNQ KLELVVTDVD LAGDVRPTFG ATPNDIRLIE DIYPPRMTFS
YQVLDGDNVV IAGDEKLRDM SFMHTTGVMN DKPLRHESKM LSDWLKKTVQ PKL