Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0435 |
Symbol | |
ID | 4923081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 485735 |
End bp | 486256 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640161964 |
Product | hypothetical protein |
Protein accession | YP_001092566 |
Protein GI | 127511369 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTTC AATCTCTACT CTTGGTGGGA GCACTGGTGT CACTCAACCT TGCCGCCGAA GAAGCCAAAG AGAATCCAGT CACAGAGGCC GGGGTGGTTA AGATCACTTG GCAGGATACG GATAACTATC GCGACGTGAA GGCTGTGGGT GACATTCAGT TTCGCTATGA GTTGCGTGTG TTCGACACCC TGACCAAGAA CCTCAACAAG GCCGCCGAGA AGACGCTTAA GCCTAATCAG AAGCTGGAGT TGGTGGTGAC AGACGTGGAT CTGGCCGGTG ATGTGCGCCC CACCTTTGGC GCGACCCCTA ACGACATTCG TCTGATCGAA GATATCTATC CGCCACGCAT GACCTTTAGT TACCAGGTGC TCGACGGTGA TAATGTGGTG ATCGCAGGTG ATGAGAAGCT CAGAGACATG AGCTTCATGC ACACCACTGG CGTGATGAAC GACAAGCCCC TGAGACACGA GTCTAAGATG CTGAGCGATT GGCTGAAGAA GACGGTGCAG CCCAAACTCT AA
|
Protein sequence | MKFQSLLLVG ALVSLNLAAE EAKENPVTEA GVVKITWQDT DNYRDVKAVG DIQFRYELRV FDTLTKNLNK AAEKTLKPNQ KLELVVTDVD LAGDVRPTFG ATPNDIRLIE DIYPPRMTFS YQVLDGDNVV IAGDEKLRDM SFMHTTGVMN DKPLRHESKM LSDWLKKTVQ PKL
|
| |