Gene Shew_0432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0432 
Symbol 
ID4921557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp484163 
End bp484672 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content56% 
IMG OID640161961 
Producthypothetical protein 
Protein accessionYP_001092563 
Protein GI127511366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA ATGAATTTTG GCAGTTAGTC ACCCGCAGCA AGCCAGAGCA AGATCAGGAG 
AGCCTGGCGG CAGAGCTTAA GGCGAAGCTG AACGAACTCG ACAACCAAGA CTTGGCGGCC
TTCGATAAGT TCTTCTCGCA GCAGATGCGC CGATCTTACC TCTGGTCGCT GTGGGGCGCC
GCCTACATAG TGACCGGGTG TGACAGCGAA TATGGCTTTG CCGAATTTCG CGCCTTTCTG
ATCTCCCTGG GGCAGGAGTG GTTCGAGCGG ATACTGCTTG ACCCCGATGC CTTGGCCGAG
CTGCCCGCCT GGCCGGAGAA GGATGGCTAT GCCTATCCCT TCGTAGAGGA TTACGATCTG
ATCGCGGGGC AGATCTATGA AGATCGCACC GGCGAGGAGC TGCCCTTTGT GCCTTCTGGG
CAGGCGACGC CTCAGGGCAA GAAGTTTTCG CCCAAGAAAA AACAGCTGAA GGCGACTTAC
CCTCAGCTGT TTCAGCTATT TCCTTTCTAG
 
Protein sequence
MNENEFWQLV TRSKPEQDQE SLAAELKAKL NELDNQDLAA FDKFFSQQMR RSYLWSLWGA 
AYIVTGCDSE YGFAEFRAFL ISLGQEWFER ILLDPDALAE LPAWPEKDGY AYPFVEDYDL
IAGQIYEDRT GEELPFVPSG QATPQGKKFS PKKKQLKATY PQLFQLFPF