| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0427 |
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| Symbol | |
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| ID | 4924114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 480322 |
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| End bp | 481275 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640161956 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092558 |
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| Protein GI | 127511361 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAA GCAAATCCTT ACGCCTTATC GCCCCACTTA TCCTGCTGCT AAGCGGCTGT
CAGGGCGCCG AGCCGCCCCA GGCTCTGGGC ACCTTAGAGC GAGACCGGGT ACTCCTGCGC
GCCACCACCT CAGAGATCAT CACGGGCTTA CCTAAACGCG AAGGTAGCCT AGTCACCCAA
GGCGAGTTGC TACTGCAATT CGACACCCGC AAACAACTTG CACGTGTTGC CAACGCCCAG
GCCCAGTGGC AGAAGGCACA GGCCTACCTG CTCAGGCTCA CCAATGGCGA ACGCCCGGAG
GATATCGCCA GCGCCCAGGC CAATCTGGAG CGTGCCACCG CCGCCATGGT GCAGGCGGAG
AAGACCTACA GGCGCATCGA CAAACTCAAG CGACAGAACC TGGTAAGCCA GCAGGAGCTG
GATCAGGCCG TTGCTAGCCG GGATCAGACC ATCGCCGAAC ATAACGCCGC GAACGAAGCC
TTGAGTAAAC TGATTGTCGG CGTGCGTCAG GAAGATATTC AGCAGGCCCA GGCGGCACTG
GATGCGGCGG CCGCCGAGCT GGATCTGGCG CGCCAGCTGC TGGAAGATCT CAGCATCACG
GCGACCCGCA GCGGTCGCCT CGACAGCCTG CCCTTTAACC TCGGCGAACG AGTGCCCGCC
AACGCCGTGG TAGTGGCGAT TCAGGCCGAC AAGGCCGCCT ATGCCAGGGT CTATATTCCC
GCCCCCGCCA TGGCCAAACT CACCATTGGG ATGCAGCTAA AAGTCCATGT CGACGGTCAG
GCGCAGCCCT TTACCGGCAC GCTACGCTGG CTCAGCAAGG AGCCGGCCTT CACCCCCTAT
TACGCCTTGA ATCAGCAGGA CAGGTCTCGC CTCGTCTATC TGGCGGAGTT CGATCTCGAC
GACAGGGCTC AGAGCCTGCC CACGGGGATC CCCGCCCAGG TGGAGCTGCC CTGA
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| Protein sequence | MTLSKSLRLI APLILLLSGC QGAEPPQALG TLERDRVLLR ATTSEIITGL PKREGSLVTQ
GELLLQFDTR KQLARVANAQ AQWQKAQAYL LRLTNGERPE DIASAQANLE RATAAMVQAE
KTYRRIDKLK RQNLVSQQEL DQAVASRDQT IAEHNAANEA LSKLIVGVRQ EDIQQAQAAL
DAAAAELDLA RQLLEDLSIT ATRSGRLDSL PFNLGERVPA NAVVVAIQAD KAAYARVYIP
APAMAKLTIG MQLKVHVDGQ AQPFTGTLRW LSKEPAFTPY YALNQQDRSR LVYLAEFDLD
DRAQSLPTGI PAQVELP
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