| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0426 |
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| Symbol | |
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| ID | 4924072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 479300 |
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| End bp | 480322 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161955 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001092557 |
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| Protein GI | 127511360 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTAA ATGCGGATCT GGCCATAGAT GCCCGAGGCG TCGATAAGCG GTTTGGCGAC
CTACTTGCGG TTGCCGAGCT GGATCTACAG GTGCAGAAGG GGCACATCTA CGGCTTTCTC
GGCCCCAATG GTTGCGGCAA GTCCACCACA ATACGCATGC TCACCGGCCT CTTGACCCCA
ACCCGGGGCG AGATCTCCGT GCTCGGCATG GCCATCCCCC AGCAGGCCGA GGCCCTCAGG
CGGCGCATAG GCTACATGAC CCAGAAGTTC TCCCTCTACG AAGACCTGAG CGTCAGGGAG
AACCTGCAAT TTATCGCCGA CATCTATGGC CTGGGTGCCA GGGAGAGCAA ACGCAAGATA
GATGAGCTGA TCGATACCTA TCATCTCGAC GCCCAGCGCC AGCAGCTAGC GGGCACCCTC
AGCGGCGGGC AGAAGCAGCG CCTGGGGCTG GCCTGCGCCT GCATCAATGA GCCCGAGCTG
CTGTTTCTCG ACGAGCCCAC CTCGGCGGTG GATCCTCAAA ACCGGCGCGA CTTCTGGGAG
CAGCTATTCG ATCTCTCCGA GCGCGGCACC AGCATACTGG TCACCACCCA CTACATGGAC
GAGGCGCAGC GCTGCCACCA GCTGGCGATC ATGGAAAGCG GCCACATTCG TGCCAAGGGC
AATCCTCAGG CGCTCCTTGA GGCGATGCCA CTGCATGTCA TAGAGATAGC TGGCCACAGA
CTGCGCCAGC TAAAGTCACA CCTGAGCCAG TTCAGCGAGA TCCCCTCCGC CGCCCAACTC
GGCGACCGTC TGCGAGTCCT AGTCGATAAG CAGATAGCAG ATCCCATCCC TTGGCTGCTG
GAGAAGAGTC GCACCATGAC AGGGCAACTA ACGCCTGAAC CGCTGAGCCC AAATCAATTT
AACGCTAGCC AACTAAAGCC AAATCAATTA AGCCTGGTCT CACCCAACCT GGAAGATCTC
TTCGTTTCCG TCACCGGTAA GGGACTCAAG ACTTCTAGGG AGGCTGCAGA TGTTACTCGC
TAG
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| Protein sequence | MPLNADLAID ARGVDKRFGD LLAVAELDLQ VQKGHIYGFL GPNGCGKSTT IRMLTGLLTP
TRGEISVLGM AIPQQAEALR RRIGYMTQKF SLYEDLSVRE NLQFIADIYG LGARESKRKI
DELIDTYHLD AQRQQLAGTL SGGQKQRLGL ACACINEPEL LFLDEPTSAV DPQNRRDFWE
QLFDLSERGT SILVTTHYMD EAQRCHQLAI MESGHIRAKG NPQALLEAMP LHVIEIAGHR
LRQLKSHLSQ FSEIPSAAQL GDRLRVLVDK QIADPIPWLL EKSRTMTGQL TPEPLSPNQF
NASQLKPNQL SLVSPNLEDL FVSVTGKGLK TSREAADVTR
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