| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0424 |
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| Symbol | |
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| ID | 4924393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 476762 |
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| End bp | 478135 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161953 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001092555 |
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| Protein GI | 127511358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGTA TTACTGAATT TGTCAGTACG ATCAACGGGT TCGTATGGGG TACTCCCATG
CTCGTGATGA TCTTAGGCGT GGGACTCTTT CTCTCCTTTG GCTTGCGGTT GATGCCGATC
CTTAAGCTGG GTACCGGCTT TAAGCTACTC TGGTCCGGAC GTATTCCCGA CAAGGATAAG
CAGATGAAGG GGGAGATCAG CCCCTTCAAT GCCCTGATGA CCTCGCTGTC GGCCACCATA
GGCACGGGTA ATATCGCAGG GGTGGCCACT GCCATCTTTA TCGGTGGCCC AGGTGCCCTG
TTCTGGATGT GGTGTACCGC CCTGGTGGGT ATGGCTACTA AGTTTTCCGA GGCCGTGCTG
GCGGTGAAAT ACCGCGAAGT GGATGATAAC GGCAACCATA TCGGCGGCCC AATGTACTAC
ATCAAGAATG GTCTGGGCAG CAAGTGGGCC TGGCTGGGTA CCGCCTTCGC CCTGTTTGGA
TCCTTTGCCG GTTTCGGTAT CGGCAACACG GTACAGGCCA ACTCTGTGGC CGATGCCCTT
AACAGCAACT TCGGTGTGCC GACTTGGGTG ACGGGTCTGG TGCTCATGGT GCTGGTGGGC
GCCGTGCTGA TGGGCGGTAT CAAGCGTATC GCCGATGTGG CGGGTAAGCT GGTGCCTCTG
ATGACGGTAT TCTATATTGC CGCCGGTCTG TCGGTGATAG TGGTTAATGC CGCAGCGATC
CCAGATGCTA TCGCCCTTAT CGTTCACAGC GCCTTCAATC CTGTGGCGGC CCAGGGCGGT
TTTGCCGGGG CGGCAGTATG GGCGGCGGTG CGCTTTGGTG TGGCCCGCGG CGTCTTCTCT
AACGAGGCCG GTCTGGGTAG TGCGCCTATC GCCCACGCGG CGGCGCAGAC CAATAACCCT
GTGGCCCAAG GCCTAGTGGC TATGCTGGGT ACCTTCATCG ATACCCTGGT GGTCTGTACC
ATTACCGGTC TGGCGATTGT CGTTTCCGGT GCCTGGACAT CGGGTGAGAA TGGCGCGGCG
CTGACCTCCT ATGCCTTCTC TCACGCCCTG CCTATGGGCA ACTATATCGT GGCTATCGCC
CTCTCTATCT TCGCCTTCAC CACCATCCTG GGTTGGAGCG TCTATAGCGA GAAGTGTGTG
CAGTACCTGT TTGGTGTGCG CGCGGTAAAA CCCTTCAGAG CCATCTGGGT CATTGTTGTT
CCCCTAGGGG CCGTCAGCTC GCTCGACTTC ATCTGGCTGC TGGCCGATAC CCTGAACGCC
ATGATGGCGA TACCAAACCT GATCGCCCTG TCGCTGCTTA GCCCTGTGGT CTTCGGCTTG
ACCCGTGAGT ACTTCATCAA GAAGCGTCAG CAGGAAGCAG AAGCCAGTAG CTAA
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| Protein sequence | MEGITEFVST INGFVWGTPM LVMILGVGLF LSFGLRLMPI LKLGTGFKLL WSGRIPDKDK
QMKGEISPFN ALMTSLSATI GTGNIAGVAT AIFIGGPGAL FWMWCTALVG MATKFSEAVL
AVKYREVDDN GNHIGGPMYY IKNGLGSKWA WLGTAFALFG SFAGFGIGNT VQANSVADAL
NSNFGVPTWV TGLVLMVLVG AVLMGGIKRI ADVAGKLVPL MTVFYIAAGL SVIVVNAAAI
PDAIALIVHS AFNPVAAQGG FAGAAVWAAV RFGVARGVFS NEAGLGSAPI AHAAAQTNNP
VAQGLVAMLG TFIDTLVVCT ITGLAIVVSG AWTSGENGAA LTSYAFSHAL PMGNYIVAIA
LSIFAFTTIL GWSVYSEKCV QYLFGVRAVK PFRAIWVIVV PLGAVSSLDF IWLLADTLNA
MMAIPNLIAL SLLSPVVFGL TREYFIKKRQ QEAEASS
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