| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0416 |
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| Symbol | |
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| ID | 4920995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 469898 |
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| End bp | 471238 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161945 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_001092547 |
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| Protein GI | 127511350 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTTCTC CAAGCATCGA AACCGAATTG AATTCATTGA AAGACGCCGT GTCTATGGCA
TTAGAATATG CCGCCAAGTT GGGCACCTCG GGGGCTGAAG TGGCCATCAG CAAGCAGCAG
GGACTCTCTG TCTCGACGCG CTTGAAAGAG GTTGAGACCG TTGAGTTTAA TAAAGATGGT
GCACTGGGGA TCACCCTGTT TCGAGATGGC TGCAAGGGGA GCTCGTCGAC CTCAGATCTG
AGCCCAGAGG CGATTCGCCG CGCCGTTAAG GCCGCCGATG ATATCGCCCG CTTCACCTCG
GAAGACCCAT TCAACGGCCT AGCCGATGCC GAGCTGATGG CTAAGCAGAT CGAAGATCTA
GAACTCTACT ATCCTCACGA GACCACGCCC GCCGAGCTCG AAGCCCTGGC GGCCCGCGCC
GAAACTGCGG CCCTGGATGC CGATGCTCGC ATTAAAAACT CCGACGGTGC CAGCGCCAAC
GCCCATACGG GTGCCAAGGT GTATGGTAAC AGCCATGGCT TCCTCAACGG TTACGTCAGC
TCACGCTACA GCCTGAGCTG TGTGGTGATC GGCGAGCAAG ATGGCCATAT GCAGCGTGAC
TATGACTATA CCGTCGCCCG CCGCTTCGAC GACCTGTGGA CGCCAGAGGC CGTGGGCCAG
CAGGCAGCCA AGAAGACCCT GAGCCGTCTC GGTGCGCGTA AGATTGCCAC CACTAAGCTG
CCTATTCTGT TCGCACCCGA TGTGGCGACC GGCCTCATGG GCCACCTGGT GGGCGCCATC
AGTGGCAGTA GCCTGTATCG CAAGTCGAGC TTTTTGCTCG ACGCCATAGA CACCCAGATC
TTCCCCGAGT GGTTCACCAT CGCCGAGCAG CCGCACCTCA AGGGCGCGCT GGCCAGTGCC
TGGTATGACA GCGAAGGGGT GGCGACGATC GATCGCAACA TCATCGACAG CGGCGTACTC
TCGACTTACC TGCTGACCAG TTATTCGGCG CGCAAGTTAG GGCTGACTAA CACAGGCCAT
GCCGGTGGCA TCTATAATTG GACGTTGTCC CATACCGGAC AGACCTTCGA TGAGCTGGTG
AAACAGATGG GCACAGGCCT TATCGTCACC GAGGTGATGG GTCAGGGCGT GAATGGCGTG
ACCGGCGACT ATTCTCGCGG CGCCGCCGGT TTCTATGTGG AGAATGGTGA GATCCTCTAT
CCAGTGGAAG AGATCACCAT AGCCGGTAAT CTCAAGGAGA TGTACCGCAA CATGGTGGCC
GTAGGTAAGG AGCAGGACCT GCGCTCCTCT ATCCGCACCG GCGCCATTCT GCTCGACGAG
ATGAAGATTG CTGGTAACTA A
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| Protein sequence | MASPSIETEL NSLKDAVSMA LEYAAKLGTS GAEVAISKQQ GLSVSTRLKE VETVEFNKDG
ALGITLFRDG CKGSSSTSDL SPEAIRRAVK AADDIARFTS EDPFNGLADA ELMAKQIEDL
ELYYPHETTP AELEALAARA ETAALDADAR IKNSDGASAN AHTGAKVYGN SHGFLNGYVS
SRYSLSCVVI GEQDGHMQRD YDYTVARRFD DLWTPEAVGQ QAAKKTLSRL GARKIATTKL
PILFAPDVAT GLMGHLVGAI SGSSLYRKSS FLLDAIDTQI FPEWFTIAEQ PHLKGALASA
WYDSEGVATI DRNIIDSGVL STYLLTSYSA RKLGLTNTGH AGGIYNWTLS HTGQTFDELV
KQMGTGLIVT EVMGQGVNGV TGDYSRGAAG FYVENGEILY PVEEITIAGN LKEMYRNMVA
VGKEQDLRSS IRTGAILLDE MKIAGN
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