| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0407 |
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| Symbol | |
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| ID | 4922996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 456232 |
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| End bp | 457734 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161936 |
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| Product | ribonuclease G |
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| Protein accession | YP_001092538 |
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| Protein GI | 127511341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.52955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACA TAGTCAAAAA CAGAGTACAG AAAAAGATAG GTTCTGAGCT ATTGATCAAT
GTGACGCCTA CCGAGGCGCG GGTGGCGCTG GTGGAATATG GCATCTTGCA AGAGGTGCAT
ATCGAGCGCC GCATGAAGCG TGGTCTGGTG GGCAACATCT ACAAGGGCAA GGTCAGCCGG
GTATTGCCTG GCATGCAGGC CGCCTTTGTG GATATAGGTC TGGACAAGGC CGCCTTCCTC
CATGCCTCAG ATATCGTACC CCATACCGAG TGTGTGGCCG ACGTCGAGAA GGGCAACTTC
GTGGTACGCG ACATCGCCGA GCTGGTGCGC CAGGGTCAGG ACATCATGGT ACAGGTGGTA
AAAGATCCCC TGGGCACCAA GGGCGCGCGC CTCACCACAG ATATCACCTT ACCCTCGCGT
TATCTGGTCT TCATGCCGGG CTCCAGCCAT GTGGGCGTGT CGCAGCGCAT CGAGTCCGAA
GAGGTACGTG CCCGTCTCAA GGGACTGACC GAGCCCTTCG TCGACGAAGA TGGTGGTTTC
ATCATTCGCA CCGCCGCCGA GAATGCCGGT GAGCAGGAGC TGATCCAAGA CGCGGCTTTC
CTACGCCGGG TCTGGGCCAA GGTGTGCGAG CGTCGCAAGC GTCCGGGCGT CTCTCTGCTC
TACCAAGATC TCGCCCTGCC AGTGCGTATC GTGCGTGATT TCGTCGGCAC AGAGTTGGAT
CAGATCCAGG TGGATTCGGG CCAGACCTAC GAGGAGCTGC TGCAGTTTAC CCAGGAGTTT
ATGCCCGAGA TCGCCGACAA GATAGAACAC TATTCCGGCC GGGTGCCCAT CTTCGATCTC
TATGATGTGG AGAACGAGGT GCAGCGCGCC TTGGGGCGCA AGGTCGAGCT CAAGTCAGGC
GGTTATCTGA TCATAGATCA GACCGAGGCC ATGACGACTG TGGATATCAA CACAGGGGCC
TTCGTCGGCC ATCGCAACCT GGAAGAGACT ATATTCAACA CCAACCTGGA GGCGACCCAC
GCCATCGCTC GCCAATTGCG CCTGCGCAAT CTGGGGGGGA TCATCATTAT CGATTTCATC
GACATGTTGA ACGAAGATCA TAAGAAGCGT GTACTCAGCA CCCTGGAGGC GGCGCTGGCC
AACGACAGGG TGAAGACCAA CGTCAGCGGC TTCTCGGGGC TCGGCCTGGT GGAGATGACC
CGTAAGCGTA CCCGCGAGAG CCTGGAGCAT GTGCTGTGCG GCGAGTGTCC GGCCTGTTTC
GGCACAGGTA GCCTGAAGAC GGTCGAGACA GTTTCTTACG AGATCTTCCG CGAGATCATC
CGCCTCAATC GTGGCTATGA TGCCGACGAG TTTCTGGTTT ATTGTGCCCC GACTGTCTAC
AACAGCCTCA CCGGCGAGGA GAGCCATCTG GTGGCAGAAC TCGGCGCCTA TATCGGCAAG
CATGTTCGCC TGCAAAACGA GCCCATGTAC GCGCAAAACA AATTCGATGT GGTGATAATG
TAG
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| Protein sequence | MSHIVKNRVQ KKIGSELLIN VTPTEARVAL VEYGILQEVH IERRMKRGLV GNIYKGKVSR
VLPGMQAAFV DIGLDKAAFL HASDIVPHTE CVADVEKGNF VVRDIAELVR QGQDIMVQVV
KDPLGTKGAR LTTDITLPSR YLVFMPGSSH VGVSQRIESE EVRARLKGLT EPFVDEDGGF
IIRTAAENAG EQELIQDAAF LRRVWAKVCE RRKRPGVSLL YQDLALPVRI VRDFVGTELD
QIQVDSGQTY EELLQFTQEF MPEIADKIEH YSGRVPIFDL YDVENEVQRA LGRKVELKSG
GYLIIDQTEA MTTVDINTGA FVGHRNLEET IFNTNLEATH AIARQLRLRN LGGIIIIDFI
DMLNEDHKKR VLSTLEAALA NDRVKTNVSG FSGLGLVEMT RKRTRESLEH VLCGECPACF
GTGSLKTVET VSYEIFREII RLNRGYDADE FLVYCAPTVY NSLTGEESHL VAELGAYIGK
HVRLQNEPMY AQNKFDVVIM
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