Gene Shew_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0406 
Symbol 
ID4922229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp455544 
End bp456134 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content58% 
IMG OID640161935 
Productmaf protein 
Protein accessionYP_001092537 
Protein GI127511340 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0424] Nucleotide-binding protein implicated in inhibition of septum formation 
TIGRFAM ID[TIGR00172] MAF protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.140165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAC TGGTATTAGC CTCTTCCTCT CCCCGTCGTC GCGAGCTACT CGCTCAAGTG 
GGTCTTGGCG ACTCAGAATT TGCTTTCGAG GCGCTATCCG CTGATATCGA CGAGAGCCAT
AGGGCAGGGG AAAGCGCCGA TGAGTTCGTG GTGCGTCTGG CAATCGAGAA GGCGCAAGCT
GGTCTGGCGC TCTGGGGACA GGCGGGCGCC GTGGTGCTGG GTTCTGATAC TATAGTGGTA
TTGGACGGCG AAATCCTAGG TAAGCCTAAG GATGAACAAG ACGCCAGGCA GATGCTTAGC
GCGCTGTCGG GCAAGCGCCA TAGCGTGATG ACCGCGGTGG CGGTGACCGA TGGTCAACGA
ACCCTGTCTC GATTAGTTGA AACTAAAGTG CAATTTTGCG GCCTAACAGA ACAGGCTATC
TTGGCCTATA TCGCCACCGG CGAGCCCATG GATAAGGCCG GTGCCTATGG CATTCAGGGT
TTAGGCGGCT GTTTCGTCGA GGCCATCGAC GGTAGCTATT CGGCGGTGGT AGGACTGCCG
CTAGTGGAAA CCCGGGCCCT GCTGGCCGAG ATGAAGCTGT TAGCCGTTTA G
 
Protein sequence
MMQLVLASSS PRRRELLAQV GLGDSEFAFE ALSADIDESH RAGESADEFV VRLAIEKAQA 
GLALWGQAGA VVLGSDTIVV LDGEILGKPK DEQDARQMLS ALSGKRHSVM TAVAVTDGQR
TLSRLVETKV QFCGLTEQAI LAYIATGEPM DKAGAYGIQG LGGCFVEAID GSYSAVVGLP
LVETRALLAE MKLLAV