| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0404 |
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| Symbol | |
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| ID | 4921963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 454178 |
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| End bp | 455059 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161933 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_001092535 |
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| Protein GI | 127511338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00230654 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTA TTTTTGCCCG CGGTATTTCG AATCAATTCA GGCTCACATT GGCAATCGTT
TTGTCGGTGA TCTTACTGGT GGCCAACGAT AGGCTGGAGC CGGTGCGCCA ATCTATCTCC
TCTGTGCTCA GCCCACTGCA ATACGTGGCT AACATCCCCG GCGCCATTCT GGATTGGTCC
GCCGAGAGTA TCGCCACCCG CAACATGTTG GCCAAGCAGA ACAAGCAGCT GCTGCGGCAG
CAACTCCTGA TGAGCGAGCG TCTGCAGCGC TTCGAGCACC TGAGACAGGA AAACGATCGT
CTGCGCGCCC TGCTAGGCTC TCCGGTACAC ATGGACTCCA AGAAGATGGT GGCCGAGGTG
ATGGAGGTGG CCAGCGATCC CTTTCGTCAC TATGTGGTGC TCAACCATGG TGCCCGCAGC
GGTGTCTTCG TGGGTCAGCC CGTGGTGGAT GCCCATGGCG TCGTCGGTCA GGTGGTGGAG
ATCAGCGAGC TGACCAGCCG GGTGCTGCTG ATTTCAGACG TGACTCATGC TATCCCGGTG
CGGGTGACCC GTAACGATGT CCGCCTGGTG GCCCAGGGTA TCGGCGAGCT CGACGAGCTC
GAACTGCGCC ACGTGGCCAA GAGTACAGAC CTTAGGGTTG GCGATCTCCT GGTCTCCTCG
GGTCTGGGTA AACGCTTTCC CGAAGGCTAC CCCGTGGCGC GCATCATGAC GGTCGAGCGC
GACGATGGCC AGAGCTATGC TACCGTCACC GCTCAGCCTT TGGCGGCACT GGACCGTATC
CGTTACCTGC TGTTGATCTG GCCAGATGGC AATCAGAGCG AGCAAGCCGA GCCTATCGAA
GCAGGCGCCG ATGCCCAGCC GCAAGCGGAG GAGACGCCAT GA
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| Protein sequence | MKPIFARGIS NQFRLTLAIV LSVILLVAND RLEPVRQSIS SVLSPLQYVA NIPGAILDWS
AESIATRNML AKQNKQLLRQ QLLMSERLQR FEHLRQENDR LRALLGSPVH MDSKKMVAEV
MEVASDPFRH YVVLNHGARS GVFVGQPVVD AHGVVGQVVE ISELTSRVLL ISDVTHAIPV
RVTRNDVRLV AQGIGELDEL ELRHVAKSTD LRVGDLLVSS GLGKRFPEGY PVARIMTVER
DDGQSYATVT AQPLAALDRI RYLLLIWPDG NQSEQAEPIE AGADAQPQAE ETP
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