| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0379 |
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| Symbol | |
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| ID | 4921042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 427878 |
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| End bp | 430073 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640161908 |
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| Product | primosomal protein N' |
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| Protein accession | YP_001092510 |
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| Protein GI | 127511313 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGT TTGTCGAAGT CGCCCTCCCC GTCCCCATGC GCCAAGCCTT TAGCTATCGC
GTCAAAGAGG CCGATCTCGA CAAGGCTCAG GTAGGCGTCA GGGTCAGGGT ACCCTTCGGT
CGCCAGCAGC TGATCGGCCT AGTGACAGGC CTAAGCCAGA GCTGCGACTT GGCGCCGAAT
CAGATCAAGT CGGTTATCAC CTTCCTAGAC CATGAAGGGG TATTACCCCC CTCGCTGTAC
AAGCTGACCC AATGGGCCGC CCGCTACTAT TTTTGCAGCC TAGGGCAGAT GTTGTCTCAG
GCCCTCCCCG TCGCCCTGCG TAAGGGTGCC GAGGTAGAGG CGCAGCAGCT ACAGGTCTGG
CGCGTGACCG CTGCCGGACA GGAAGCGGAT ATCGATCTGC TAAAGCGTGC ACCCGCCCAG
CGCAAGCTGC TGCTTGCCCT GTTAGAAACA GAGCTCAGCC AGGATGAACT CAATGCCCTG
GAGCAGAGCA AGACGGCGCT AAAGGCTCTT GTTGAACGGG GCTGGATAGA GTGTATCGAG
CGGCGTATCG AATCAAATCT CAGCTGGCGC GACGGGCTCG AACTCGATGA GACGCCCCAT
CAGCTCAATC CCGAACAGGC CATCGCCGTC GCCATGCTCA ACCAACAGCA GGGCTACCAC
TGTACCCTAC TCGAGGGGAT CACAGGTTCG GGCAAGACAG AGGTCTATCT GGCGCTGCTG
GAAACGGTAC TTAAGCAGGG CAAACAGGCG CTGATCTTGG TGCCCGAGAT CGGCCTGACA
CCCCAGACCA TCAGCCGCTT CAAGCGTCGC TTCAAGGTGC AGGTGGCGGT GATCCACTCT
GGGCTCACCG ACAATCAACG CCTGAGCGCC TGGCGCCTGG CCAGAAGTGG CGAGGCCGCC
ATCATCATCG GTACCCGCTC GGCGCTGTTC ACCCCCATGC GCTATCCCGG CATCATCATC
CTGGATGAGG AGCACGACGC CAGCTTCAAA CAGCAAGAGG GGATCGGCTA TCACGCCCGG
GACTTAGCCG TGATGCGCGG CCATCTGGAA TCGATTCCCG TGCTCCTTGG CAGCGCCACC
CCCTCCTTGG AGACGCTGCA GAATGCCCTC TCCGGGCGCT ACCAACACCT GAGCCTGGGA
AGCCGCGCCG GCGCCGCCGA GAAGGTGCGC CAGGGGATCA TCGACATCCG CAATCAGCCG
CTCAAGAATG GTCTCTCCCA TGGCCTGCTC AACGAGATGC GAATCCATCT GGATGCGGGC
AATCAGGTGC TGCTGTTTCT CAACCGTCGC GGCTTCGCCC CGGCGCTGCT GTGTCACGAG
TGCGGCCACC TGCACGAGTG CGATCGCTGC GACGCCTTCT TCACTGTGCA TCAGTCCCTA
GGCGAGATCC GTTGCCACCA CTGCGGCAAT CAGTACGCCA TCCCCCGGCA GTGCCACCAG
TGCGGCAGCA CCATGTTGAT GGGCCAAGGG GTGGGCACAG AGCAGCTGGC CGACGCTCTG
GCTAAGGAGT TTCCCAACTA CCCTGTGGTG CGGATCGACC GCGACACCAC CAGCCGCAAA
GGGGCGCTGG AAACCCACCT TAACGCCATC CATAAGGGGG AATATAAGAT CTTGGTCGGC
ACCCAGATGC TCGCCAAGGG CCACCATTTC CCCGACGTCA CCTTGGTCGG CCTGTTAGAT
GTGGATGGCG CCCTGTTCAG CGCCGACTTT CGCGCCCCCG AGCGTTTCGG CCAGCTCTAT
ACTCAGGTAT CGGGCCGCGC CGGACGAGCG CGCAAGCCGG GCACTGTGCT GCTGCAGACC
CACCAATGTG ACAACCCCAT ACTGAGAGAG TTGATGCACA AGGGGTATGG CGAGTTCGCC
CGCGGCCAGC TAGAGGAGCG TAAACAGGCC CTGTTGCCGC CGGCCTGGCA CATGTTGCTG
TTGCGTGCCG AGGCCCACAA GGCCGAAGAT GCCGACGCCT TCCTCGCCCA GGTTGCCCAG
TTACTGCCGC AAGACGAGCA GTGCGAGATC ATCGGTCCCA TGCCCGCCCC CATGGACAGA
AAGGCCGGCA AGTTCCGCCG TCAGCTGATG TTCCAGACCA AGACCCGCGG GCTGTTGCAG
CAGGCCTTCG AGCAGGCATT GCCGCAGATC GAAGCCCTGC CCCTGGCCAA GCGATGCCGC
TGGAGCCTAG ATCGCGACCC GCAGGATCTC CTGTGA
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| Protein sequence | MSLFVEVALP VPMRQAFSYR VKEADLDKAQ VGVRVRVPFG RQQLIGLVTG LSQSCDLAPN
QIKSVITFLD HEGVLPPSLY KLTQWAARYY FCSLGQMLSQ ALPVALRKGA EVEAQQLQVW
RVTAAGQEAD IDLLKRAPAQ RKLLLALLET ELSQDELNAL EQSKTALKAL VERGWIECIE
RRIESNLSWR DGLELDETPH QLNPEQAIAV AMLNQQQGYH CTLLEGITGS GKTEVYLALL
ETVLKQGKQA LILVPEIGLT PQTISRFKRR FKVQVAVIHS GLTDNQRLSA WRLARSGEAA
IIIGTRSALF TPMRYPGIII LDEEHDASFK QQEGIGYHAR DLAVMRGHLE SIPVLLGSAT
PSLETLQNAL SGRYQHLSLG SRAGAAEKVR QGIIDIRNQP LKNGLSHGLL NEMRIHLDAG
NQVLLFLNRR GFAPALLCHE CGHLHECDRC DAFFTVHQSL GEIRCHHCGN QYAIPRQCHQ
CGSTMLMGQG VGTEQLADAL AKEFPNYPVV RIDRDTTSRK GALETHLNAI HKGEYKILVG
TQMLAKGHHF PDVTLVGLLD VDGALFSADF RAPERFGQLY TQVSGRAGRA RKPGTVLLQT
HQCDNPILRE LMHKGYGEFA RGQLEERKQA LLPPAWHMLL LRAEAHKAED ADAFLAQVAQ
LLPQDEQCEI IGPMPAPMDR KAGKFRRQLM FQTKTRGLLQ QAFEQALPQI EALPLAKRCR
WSLDRDPQDL L
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