Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0378 |
Symbol | argS |
ID | 4921410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 426010 |
End bp | 427755 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640161907 |
Product | arginyl-tRNA synthetase |
Protein accession | YP_001092509 |
Protein GI | 127511312 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0018] Arginyl-tRNA synthetase |
TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC ATATTCAATC TTTGCTCGAA CAAGCCATTC AAACCCTAAA ACAGCAGGCG ATCATCCCTG CCGATTTTGA GGCTCGTATT CAGGTTGACC GAACCAAAGA CAAAACCCAC GGTGATTTTG CCACCAACCT AGCCATGATG CTGACCAAGG TGGCTCGCAA GAATCCTCGT GAGGTCGCAC AGCTGATAAT CGATAGCCTG CCACAAAACA GCCAGGTGGC TAAAGTTGAG ATCGCCGGCC CAGGTTTCAT CAACTTCTTT ATCGATGAGA ACGCCCTGAC CAACCAGCTG ATGGCCGCCC TGAGCGACGA TCACCTGGGT GTAACCCTGC CAACGCCGCA GACAGTGGTG GTCGACTACT CTTCGCCAAA CCTGGCCAAA GAGATGCACG TAGGCCACCT ACGTTCAACC ATTATCGGTG ACGCCGTGGT ACGCGCGCTG GAGTTCCAGG GTCACAAGGT GATCCGCCAG AACCACGTCG GCGACTGGGG CACCCAGTTC GGCATGCTGC TGGCCTACAT GGAAGAGCTA CGCGCCCAGC AAGGCGAGCA AGCCCAGGTT GAACTGGCGG ATCTCGAGAG CTTCTACCGC GCCGCAAAGG TACGTTTCGA CGAGTCGGAA GAGTTTGCTA CCCGCGCTCG CCAGCTCGTG GTTGAGCTGC AATCGGGCGA CGAGTACTGC AACAAGCTAT GGCGTGAATT TAACGATATC TCACTGAGCC ATTGCCACGA GGTTTATGAG CGTCTGGGCG TGAGCCTGAC CCGCGCCGAC GTGCGCGGCG AGAGCGCCTA CAACGATGAC CTCGAGCAGG TGGTACGGGA TCTGGATGCC CAGGGCCTAT TGTCAGAAAG TAACGGCGCC AAGGTGGTCT TCCAGGATGA GTTCCAAACC AAAGAGGGTG AACCACTGCC TGTGATCATC CAGAAGGCCG ACGGCGGCTT CCTGTATGCC ACCAGCGATC TGGCGGCGAT GCGCTATCGC TCAAACGTAC TCAAGGCCGA CCGCGCCCTG TACTTCGTCG ACCTGCGTCA GGCCCTGCAC TTCCAGCAGG TATTCAGCCT GGCCCGCACC GCTAACTTCG TCCGTCCAGA GCTGAGTCTG GAACACATGG GCTTTGGCAC CATGAACGGC GAAGATGGTC GCCCATTCAA GACCCGCTCT GGTGGCGTGG TGAAGCTGGT TGATCTGCTG AGCGAGGCCG AGACCCGTGC GCTGGAACTG GTACGCAGCA AGAATCCAGA TATGGATGAA GAGGAGCTGG CCAAGATCGC CAAAGTGGTG GGTATCGCCT CGGTGAAATA TGCCGACCTG TCGAAGAACC GCGCCAGTGA CTACATCTTC AGCTTCGAGC AGATGCTGAG CTTCGAGGGC AACACGGCGC CTTACCTGCT CTACGCCTAC ACGCGTGTTG CAGGCATCTT CAAGCGTGCG GCCGAAATCG ACCTCACGGG CGCCAGCATC AAGCTGGAGC ACGACAAAGA GAAAGAGCTG GGCAACAAGC TGGCCCAGTT TGCCGAGGTG CTAGGCCGCA TGGTGGCCAA GGGTCAGCCT CACGCCCTGT GTGGCTACCT GTTTGAACTG GCTGGCGCCT TCTCAAGCTT CTACGAGGCC TGCCCAGTGC TGGCGGCCGA CTCAGAAGAT GAGAAGAAGA GCCGTCTATT GCTAGCACAG CTGACCGCTA AGACGCTGAA GCAGGGTCTT GATCTACTGG GTATCGAAAC CTTAGAACGC ATGTAG
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Protein sequence | MKSHIQSLLE QAIQTLKQQA IIPADFEARI QVDRTKDKTH GDFATNLAMM LTKVARKNPR EVAQLIIDSL PQNSQVAKVE IAGPGFINFF IDENALTNQL MAALSDDHLG VTLPTPQTVV VDYSSPNLAK EMHVGHLRST IIGDAVVRAL EFQGHKVIRQ NHVGDWGTQF GMLLAYMEEL RAQQGEQAQV ELADLESFYR AAKVRFDESE EFATRARQLV VELQSGDEYC NKLWREFNDI SLSHCHEVYE RLGVSLTRAD VRGESAYNDD LEQVVRDLDA QGLLSESNGA KVVFQDEFQT KEGEPLPVII QKADGGFLYA TSDLAAMRYR SNVLKADRAL YFVDLRQALH FQQVFSLART ANFVRPELSL EHMGFGTMNG EDGRPFKTRS GGVVKLVDLL SEAETRALEL VRSKNPDMDE EELAKIAKVV GIASVKYADL SKNRASDYIF SFEQMLSFEG NTAPYLLYAY TRVAGIFKRA AEIDLTGASI KLEHDKEKEL GNKLAQFAEV LGRMVAKGQP HALCGYLFEL AGAFSSFYEA CPVLAADSED EKKSRLLLAQ LTAKTLKQGL DLLGIETLER M
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