| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0375 |
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| Symbol | |
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| ID | 4924134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 422504 |
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| End bp | 423028 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640161904 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001092506 |
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| Protein GI | 127511309 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACAA TCGTTTCAGT ACGTCGCAAC AATCAGGTTG TCATTGCCGG AGACGGCCAG
GTATCACTGG GAAATACAGT GATGAAAGGA AACGCCAGAA AGGTTCGACG CCTGTATCAC
AACAAGGTCC TCGCGGGCTT TGCCGGCGGC ACCGCCGATG CTTTTACCCT ATTCGAACGC
TTCGAATCTA AGTTAGAGAT GCACCAGGGC CATCTGATGC GCGCCGCGGT CGAGATGGCC
AAAGATTGGC GCTCAGACAG GGTGCTGCGC AAGCTCGAGG CACTCTTGGC GGTAGCCGAT
ACCGAGTGCA GCCTGATCAT CACAGGTAAC GGCGATGTGG TGCAGCCAGA AAACGACCTG
ATCGCCATAG GCTCAGGCGG CAACTTTGCC CAGGCCGCGG CCACGGCACT GCTGGAAAAT
ACCGATCTCA GCGCCAAGGA GATCGCCGAA AAGTCTTTGA CCATTGCCGG TGACATCTGT
GTATTCACCA ACCAATTCAA GACGATAGAA GAACTGAATT ACTAA
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| Protein sequence | MTTIVSVRRN NQVVIAGDGQ VSLGNTVMKG NARKVRRLYH NKVLAGFAGG TADAFTLFER
FESKLEMHQG HLMRAAVEMA KDWRSDRVLR KLEALLAVAD TECSLIITGN GDVVQPENDL
IAIGSGGNFA QAAATALLEN TDLSAKEIAE KSLTIAGDIC VFTNQFKTIE ELNY
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