| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0370 |
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| Symbol | |
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| ID | 4923368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 418183 |
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| End bp | 419109 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640161899 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001092501 |
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| Protein GI | 127511304 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGGC ATTCGACCTC AACTCAGGTG GCCGCGCCCT TGGGGGCTTA TCTTCAGGTG
ACCAAACCCG GGATTATCAT GGGAAACCTC ATCGCCGTGG TGGGCGGGTT TCTCCTGGCT
GCCAGGGGGG AGGTCGATGC CGTCTTGATG CTGGCGACGC TGGTGGGGCT CTCTCTGGTG
GTGGCCTCAG GCTGCGCCAT CAACAACTAT ATCGACCGGG ATATCGACGC CAAGATGCAG
CGCACCTGCC GTAGGGCGAC GGTGACCGGC GCTATCCCAC TTAAGCAGGT ACTTGGCTTA
GGCATAGCCC TGGGCGTACT CGGCTTTGGC CTGCTGGCCT GGTTTACCAA CCTGGCGGCC
TTGCTGTTTG CCGCCTTCGG CTACCTGGTT TACGTGGGGC TCTACAGCCT CTACATGAAG
CGCAACTCCG TCTATGGCAC CCTGGTCGGC AGCCTCTCGG GCGCCGTGCC GCCCGTGGTG
GGTTACTGCG CCGTGACCGG CAGGATGGAT GGCGCTGCGC TGATCCTGCT GGCCATGTTC
AGCCTGTGGC AGATGCCGCA CTCCTATGCC ATCGCCATCT TTCGCTTTAA GGACTATGAG
GCGGCCAATA TTCCTGTGCT GCCTGTGGCC CAAGGCGTAG AAAAGGCCAA GCTGCATATC
GTCTTCTACA TTGCCCTGTT CGCCCTGGTA TCGACCCTGC TACCCCTGGC GGGTTATACC
GGGGTGGGCT TTATGGCGGT GAGTTGCGTG ACCAGCTTCT GGTGGCTACT GATGGCGCTA
AAAGGCTATC GCAGCGATGT GAACCTGCTG CGTTGGTCAC GCCAGGTGTT CGGTTTCTCG
ATACTGACCA TAGCCATCCT GAGCCTCACC ATGGCGCTGG ACTTTCAGGT GGCCGGCCAG
GCGCCGCTGC TGGCCATGTT GGGCTAG
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| Protein sequence | MIRHSTSTQV AAPLGAYLQV TKPGIIMGNL IAVVGGFLLA ARGEVDAVLM LATLVGLSLV
VASGCAINNY IDRDIDAKMQ RTCRRATVTG AIPLKQVLGL GIALGVLGFG LLAWFTNLAA
LLFAAFGYLV YVGLYSLYMK RNSVYGTLVG SLSGAVPPVV GYCAVTGRMD GAALILLAMF
SLWQMPHSYA IAIFRFKDYE AANIPVLPVA QGVEKAKLHI VFYIALFALV STLLPLAGYT
GVGFMAVSCV TSFWWLLMAL KGYRSDVNLL RWSRQVFGFS ILTIAILSLT MALDFQVAGQ
APLLAMLG
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