Gene Shew_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0369 
Symbol 
ID4924107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp417846 
End bp418172 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content55% 
IMG OID640161898 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_001092500 
Protein GI127511303 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CCACTACCCA TGGTCAGGAC GATCTGGCCG CCAGCATCAA GTCCTATCTT 
ACCGGCTTCC TGCTCTCTGT GGTGTTGACC GGCATTCCCT TCTGGGCGGT GATGACCCAC
AGCCTGGAGA CCTCGACCAC CCTGGCCATA GTGCTGGTGT TGGCCGTGGT GCAGATTCTG
GTGCATCTTA AGTATTTCTT GCACCTGGAT TTTTCCAAGG AAGGCAAGGT GAATACCCTG
TCGTTTATGT TTACCGCCCT GGTGATTGTC ATGGTGGTTG GCCTGTCGGT GTGGATCATC
TACGCCGCCA ACGACCTCAT GATGTAG
 
Protein sequence
MSQATTHGQD DLAASIKSYL TGFLLSVVLT GIPFWAVMTH SLETSTTLAI VLVLAVVQIL 
VHLKYFLHLD FSKEGKVNTL SFMFTALVIV MVVGLSVWII YAANDLMM