| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0367 |
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| Symbol | |
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| ID | 4924300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 415238 |
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| End bp | 417226 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161896 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001092498 |
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| Protein GI | 127511301 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCTT TTCTTGGAAA ATTAACACTG GATGCGGTTC CCTTCCACGA ACCCATCATC
ATGGTGACCC TGGCTGCGGT CGCCGTGATA GGCCTTGTTA TCGCGGCCCT GATCACCAAG
CATAAGAAAT GGGGCCCTCT GTGGCGCGAC TGGCTGACCT CAGTCGACCA TAAACGCCTG
GGGATCATGT ATATCCTGCT GGCCTTCGTC ATGCTGATCC GTGGCTTCTC CGATGCCATC
ATGATGCGAA CTCAACAGGC CATGGCCACC AATGGCGCCG CCGGCTACCT GCCGCCCGAG
CACTATGACC AGATCTTCAC CGCCCATGGC GTCATCATGA TCATCTTCAT GGCGATGCCC
TTCATGATAG GCCTGATGAA CCTGGTGTTA CCGTTACAGA TAGGCGCGCG CGACGTTGCC
TTTCCGTTTC TGAATAACCT CAGCTTCTGG TTGACCGCCT CCGGCGCCGT GCTGATCAAC
ATCTCTCTGG GGGTGGGTGA GTTTGCCAAG ACAGGTTGGG TGGCCTATCC GCCGCTGTCT
GAGCTGGCCT ATAGTCCCGG GGTTGGGGTC GATTACTATA TCTGGGCGCT GCAGATCTCC
GGCATAGGGA CCACTCTCAC CGGGGTCAAC TTCCTGGTGA CTGTGCTTAA GATGCGCGCG
CCGGGCATGA AGTTGATGCA GATGCCGATC TTCACCTGGA CCTGCACCTG GGCCAACATA
CTGATCGTCG CCTCATTCCC GATTCTGACG GCCGTGTTGG CCATGCTGAC CCTGGACAGA
TACATGGATT TCCACTTCTT CACCAACGAA GGCGGTGGTA ATGCCATGAT GTATATCAAT
CTGTTCTGGG CCTGGGGACA CCCTGAGGTG TATATCCTGA TCCTGCCAGC CTTCGGTATC
TTCTCCGAGG TGATCTCAAC CTTTACCGCC AAGCGTCTGT TTGGTTACAA GTCTATGGTT
TGGGCCAGCG GCGCCATCTC GATTCTGGGC TTCATCGTCT GGCTGCATCA CTTCTTTACC
ATGGGCTCGA GTGCCAACGT CAACGCCTTC TTCGGGGTGA TGACCATGGT GATTGCCGTG
CCGACCGGGG TGAAGCTGTT TAACTGGCTG TTCACCATCT ATCGTGGACG CCTGAAGCTG
ACGGTGCCCG TACTCTGGAC CCTGGGCTTC ATGGTGACCT TTACCATTGG CGGCATGACA
GGCGTGTTGC TGGCGGTGCC TGGCGCCGAC TATGTGCTAC ACAACAGCCT GTTTTTGATT
GCGCATTTCC ACAACACCAT CATTGGCGGC GCCGTGTTTG GCTACCTGGC GGGCTTTGCC
TTCTGGTTCC CTAAGGCGAC CGGTTTCCAC CTCAACGAAC GTCTGGGTAA GGCGGCATTC
TGGTGCTGGC AGGCGGGCTT CTATGTCGCC TTCATGCCGC TGTATGTGCT GGGCTTCCTC
GGCATGACAC GTCGTCTCAA TCAGACTGAT AACCCGGACT GGAACTTCTG GATCTATCTG
GCGGCAGTTG GTGCCTGCAT CATCTTCGTC GGCATAGTGC TGCAGTTTGT TCAGCTGTAC
GTGAGCATCC GCGATCGTGA GCAGAACCGT GACACCACCG GCGACCCATG GAATGGTCAC
ACCCTTGAGT GGTCGACCGC CTCGCCACCT CAGTTCTATA ACTTTGCCCG TCTGCCTAAG
GTCGTGGATA TCGACGCCTT CACCCATGCC AAGGAGCAGG GCCAGGCCTA TCAGATGCAG
GAGAGCTATC AGCCGATCCA CATGCCGAAG AATACCGGCC ATGGGGTTTG GATGGCCCTT
GGGATCACCG CCGCCGGCTT TGCCGCCATC TGGCACATCC TCTGGCTGGC CATCGCAGGT
TTCCTGGGCG CTTTCATCGT CTTCCTGATG CGAGCCTACG ACACAGACAC CGACTACTAC
GTGCAGGGCG ATGAGGTTAA GCGTATCGAA ACCGCGCACC TGAACAACTT ATCTAAGGGG
CAGATATGA
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| Protein sequence | MSSFLGKLTL DAVPFHEPII MVTLAAVAVI GLVIAALITK HKKWGPLWRD WLTSVDHKRL
GIMYILLAFV MLIRGFSDAI MMRTQQAMAT NGAAGYLPPE HYDQIFTAHG VIMIIFMAMP
FMIGLMNLVL PLQIGARDVA FPFLNNLSFW LTASGAVLIN ISLGVGEFAK TGWVAYPPLS
ELAYSPGVGV DYYIWALQIS GIGTTLTGVN FLVTVLKMRA PGMKLMQMPI FTWTCTWANI
LIVASFPILT AVLAMLTLDR YMDFHFFTNE GGGNAMMYIN LFWAWGHPEV YILILPAFGI
FSEVISTFTA KRLFGYKSMV WASGAISILG FIVWLHHFFT MGSSANVNAF FGVMTMVIAV
PTGVKLFNWL FTIYRGRLKL TVPVLWTLGF MVTFTIGGMT GVLLAVPGAD YVLHNSLFLI
AHFHNTIIGG AVFGYLAGFA FWFPKATGFH LNERLGKAAF WCWQAGFYVA FMPLYVLGFL
GMTRRLNQTD NPDWNFWIYL AAVGACIIFV GIVLQFVQLY VSIRDREQNR DTTGDPWNGH
TLEWSTASPP QFYNFARLPK VVDIDAFTHA KEQGQAYQMQ ESYQPIHMPK NTGHGVWMAL
GITAAGFAAI WHILWLAIAG FLGAFIVFLM RAYDTDTDYY VQGDEVKRIE TAHLNNLSKG
QI
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