| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0351 |
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| Symbol | |
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| ID | 4920782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 400254 |
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| End bp | 400946 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640161879 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001092482 |
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| Protein GI | 127511285 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.590847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAGTT TAGTGTTCGC CATGGCGGTA ACCCTGGTCT GTTTTATTGC GCCCATCTGG
CGCCACTATT TCATCCAAGA GGAAAACGCC CTGGCTGGCG ATGCGACCAT CCCTGCTAGG
AAGCAGACCC TGACACCTAT TGTGGTGACA GGCATGCTAC TGCTGATACC ACTTACCCTC
TATGGCCTGC TGGGCCGCTT CAACGACTGG CATACCGGCC AGATCGACGA GAACATCGAT
TATTTGATCG CCGCCGACAT CAACAAGAAT GCGCGCATCT TGGATGACAC GCCTCTAGAC
CGACTGGCCT TGCTTAACCT GGCCAATGCC TACGCCGAAG GGGGACGCTA CAGCGAGGCG
GTAGAGACCT TAGATAAATT ACTGGCAATA GCGCCCGACG CCGAGCTGTA TGGCATGAAG
GCGACGGCGC TCTATTACCG TGATAACCGC GCCATGAGCC TGGAGGTCTC CCTCGTGATA
TCCCAGGCGC TGGCGCTCGA CCCCGAGGAA GTGCAGTCAT TGCTGCTGAT GGCGACCCAC
GCTTATCTGA ACAAGGATTT TCAGCAAGCG ATCGTCCATT GGCGGCAGTT ACTGGACAGC
GATAACCCCA ACATAAACCG AGCATCGATT AACAGTGCGA TTGTCAACGC TGAGCAGAAG
ATGGCTAACC GTACCGTGAC TGCATCTGAG TAA
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| Protein sequence | MISLVFAMAV TLVCFIAPIW RHYFIQEENA LAGDATIPAR KQTLTPIVVT GMLLLIPLTL
YGLLGRFNDW HTGQIDENID YLIAADINKN ARILDDTPLD RLALLNLANA YAEGGRYSEA
VETLDKLLAI APDAELYGMK ATALYYRDNR AMSLEVSLVI SQALALDPEE VQSLLLMATH
AYLNKDFQQA IVHWRQLLDS DNPNINRASI NSAIVNAEQK MANRTVTASE
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