| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0340 |
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| Symbol | |
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| ID | 4923758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 385890 |
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| End bp | 386822 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640161868 |
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| Product | Ppx/GppA phosphatase |
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| Protein accession | YP_001092471 |
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| Protein GI | 127511274 |
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| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0248] Exopolyphosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00977932 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACT CTGGCGTCAG TCCCTTGTAT GCGGCCATTA CCTTAGGCTC GAATAGTTTC
AATATGCTGG TGGCGCAAAC CCGTGCCGGC AAGCCGACCG TAGTGGCCAA GTATAAGCGC
AAGGTACGCC TTGCCGAGGG GATAGGCGCA GATGGTGTGC TCTGCCCCGA GGTGTTCGAC
CGTGGCCTGG ATTGTCTGCA GATGTTTTCG CAGATGCTGG ACCACGAAGG GGTGAGTCGT
GACAATATCG CCGTCATCGC CACGGCGACG CTGCGCAGTA TCAGCAACGC AGACGCCTTC
TGCGAGGCAG CATTACCTAT CCTGGGGCAA CCCATAGAGA TCATCTCCGG CCTGCGAGAG
GCTGAGCTTA TCTATCAGGG CATGGTCGCC ACCACTGTGG GTGAGGGGCG ACGCCTGGTG
ATCGATATCG GCGGCGCAAG TACCGAGTTC ATCATAGGTG ATGGCAATAA GGTGCTGCTT
AAGACCAGCC TTCCCATGGG CTGTGTCACC TTCAAGGATA AGTTCTTCAA CAGCTTCCCA
TTTCAGCAAC TGGATTTCGA TGCGGCCCAG AGTCAGGTCG AGACCGCCCT GGGTGACTAT
CGCAGGCGGC TGACCGATTA TGGCTGGCAC TGTGTGGTTG GCGCCTCGGG GACTGTACAG
TCTGTGGTGG AGCTACTCAA CGATCGCGGC GTCTCCGCCA CCATTACCCC GGCAGTGCTA
GCCGATCTCA GGGGTGAGGT GCTGGCACAG ACAGATGTGA GCCTGCGAGA CATTCGCGGC
CTACATAGCG AGCGTGCGCC CACCTTTGCC GCTGGCTTAG CCATACTATC TGCCCTGTTT
AATCTGCTCG ACATTCAGTC CCTCAATCTC TCCGGCGGCG CCCTGAGAGA AGGCGTGCTG
CATCAACTTG CCCAGCGAGT CTTGGCCGCC TAA
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| Protein sequence | MKHSGVSPLY AAITLGSNSF NMLVAQTRAG KPTVVAKYKR KVRLAEGIGA DGVLCPEVFD
RGLDCLQMFS QMLDHEGVSR DNIAVIATAT LRSISNADAF CEAALPILGQ PIEIISGLRE
AELIYQGMVA TTVGEGRRLV IDIGGASTEF IIGDGNKVLL KTSLPMGCVT FKDKFFNSFP
FQQLDFDAAQ SQVETALGDY RRRLTDYGWH CVVGASGTVQ SVVELLNDRG VSATITPAVL
ADLRGEVLAQ TDVSLRDIRG LHSERAPTFA AGLAILSALF NLLDIQSLNL SGGALREGVL
HQLAQRVLAA
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