Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0338 |
Symbol | |
ID | 4921538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 384085 |
End bp | 384411 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640161866 |
Product | thioredoxin |
Protein accession | YP_001092469 |
Protein GI | 127511272 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA AAATTATTAC CCTAAGCGAC GACAGCTTTG AAAACGACGT TTTAAAATCA GACCTGCCAG TCCTCGTTGA TTTCTGGGCA GAATGGTGCG GCCCTTGTAA AATGATCGCC CCAATCCTGG ATGACGTTGC AGACGAATAT GCCGGTAAGG TAACTATCGC TAAGCTAAAC GTAGACCAAA ACAACGCCTC TCCGGCTAAG TACGGCGTAC GTGGCATTCC CACACTGCTT CTATTCAAGA ATGGTGAGCT AGCCGACACT AAAGTAGGCG CCCTTTCTAA AACTCAACTT AAAGAGTTCA TCGACGCACA ACTATAA
|
Protein sequence | MSDKIITLSD DSFENDVLKS DLPVLVDFWA EWCGPCKMIA PILDDVADEY AGKVTIAKLN VDQNNASPAK YGVRGIPTLL LFKNGELADT KVGALSKTQL KEFIDAQL
|
| |