Gene Shew_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0338 
Symbol 
ID4921538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp384085 
End bp384411 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content46% 
IMG OID640161866 
Productthioredoxin 
Protein accessionYP_001092469 
Protein GI127511272 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AAATTATTAC CCTAAGCGAC GACAGCTTTG AAAACGACGT TTTAAAATCA 
GACCTGCCAG TCCTCGTTGA TTTCTGGGCA GAATGGTGCG GCCCTTGTAA AATGATCGCC
CCAATCCTGG ATGACGTTGC AGACGAATAT GCCGGTAAGG TAACTATCGC TAAGCTAAAC
GTAGACCAAA ACAACGCCTC TCCGGCTAAG TACGGCGTAC GTGGCATTCC CACACTGCTT
CTATTCAAGA ATGGTGAGCT AGCCGACACT AAAGTAGGCG CCCTTTCTAA AACTCAACTT
AAAGAGTTCA TCGACGCACA ACTATAA
 
Protein sequence
MSDKIITLSD DSFENDVLKS DLPVLVDFWA EWCGPCKMIA PILDDVADEY AGKVTIAKLN 
VDQNNASPAK YGVRGIPTLL LFKNGELADT KVGALSKTQL KEFIDAQL