| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0335 |
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| Symbol | frdB |
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| ID | 4920845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 380667 |
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| End bp | 381398 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640161863 |
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| Product | fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_001092466 |
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| Protein GI | 127511269 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGG GTCGTACACT AACCTTTAAT ATCTTCCGTT ATGATCCTCA GATGCCGGAC
GATAAGCCCA AGATGGTCAA GTATCAGCTG GAAGAGGCGC CGGGCATGAC GGTGTTTATT
GCGCTGAACA TGCTGCGTGA GCAGCAGGAT CCGTCACTGC AGTTCGATTT CGTCTGCCGC
GCCGGGATCT GCGGTAGCTG CGCCATGGTG ATCAACGGTT ATCCCACCTT GGCCTGTCGC
ACCCTGACCA GCAAGTATCC TAAGGGGGAT ATCACCCTGA TGCCGCTGCC GGGTTTCGAG
CTGATTGGCG ACCTGTCGGT CAACACGGGT AAGTTTATGC GCGAGCTGGC GGAGCGTCTC
AAGCTGTGGC TGCATCCGAG AAACGATGAG GCGGACATTC ACCGCATCGA GGCGCCCATG
GATCCCGAGG AGGCGGCCAA GCTCTATGAG CTGGAGCGCT GCGTCGAATG TGGCGTGTGT
GTCTCGGCCT GTGCCACCAA GCAGATGCGC GACACCTTCG TCGGCGCCGT GGGCATGATG
AAGATCGCTC GCTTCGAGCT CGACAGTCGC GATGCCCGTA GCGTGGAAGA CTTCTATCAC
GTGATAGGCA ATCAAGATGG GGTGTTCGGT TGCATGACCC TGCTGGGCTG TCAGGACAAC
TGTCCTAAAG ACCTGCCGCA TATGCAGCAG ATCGCCTATC TCAGACGTAA GATGGCGACC
GCTTTGGTAT AA
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| Protein sequence | MSQGRTLTFN IFRYDPQMPD DKPKMVKYQL EEAPGMTVFI ALNMLREQQD PSLQFDFVCR
AGICGSCAMV INGYPTLACR TLTSKYPKGD ITLMPLPGFE LIGDLSVNTG KFMRELAERL
KLWLHPRNDE ADIHRIEAPM DPEEAAKLYE LERCVECGVC VSACATKQMR DTFVGAVGMM
KIARFELDSR DARSVEDFYH VIGNQDGVFG CMTLLGCQDN CPKDLPHMQQ IAYLRRKMAT
ALV
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