Gene Shew_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0332 
Symbol 
ID4923855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp377079 
End bp377801 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content56% 
IMG OID640161860 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_001092463 
Protein GI127511266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.475162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTA ACAGCTTGCA GTACCAACAC ACACATTACG CTGCTTTGGG CAGTCCCTGG 
TCCGCCAAGG CTGACAGAAT ACAGAGTGCC ACCGGCATCT TATTGGGATG TTTTTTGCTG
GCGCATCTGC ACTTCGAGTC GAGCATTCTC TTCGGTAAAG AGACCTTCTA TCACGTGGTG
CAGTTCCTCG AAGGCGGCAT GTTCAGCAGC ACAGGCCATG GCATGCCGAT AGTGACCAAG
GTGTTCTCTA TCTTTATCAT GCTGGTTGTG ATGCTGCATG CGGCGGTGGC GCTGCGTCGC
TTCCCGGCCC AGCTGGGGCA ATGGCGCGCG CTGCGTAATC ACATGCAGGG GATCAAGCAT
AAAGACAGCC ACGCCTGGTT CTGGCAGCTG GTGACAGGCT TCATCCTGTT CTTCCTGGCG
CCGGTGCACA TCTTTACCAT GATCACCAAC CCGGAGATCG GCCCCCATCT GTCGGCCGAG
CGTGTCTATC ATGCCAACGC CTGGTTGCTC TACGCCCTGT TGCTGCCCGC TGTGGTGGTG
CACGCCATGA TAGGCCTCTA CCGCGTCGCG GTGAAGTGGG GGCTTATCCG TCACCGTAAG
GGGCTGAGAA AGGCGATCAA GGTGTTGATC ATCTATCTGA TGACCCTGGG CATCTTGAGC
CTCATCTCTT ACATCATGAT AGGCCGATCA CTCGTCTTGC CAATTACGCC ATTTGTGCCA
TAA
 
Protein sequence
MKVNSLQYQH THYAALGSPW SAKADRIQSA TGILLGCFLL AHLHFESSIL FGKETFYHVV 
QFLEGGMFSS TGHGMPIVTK VFSIFIMLVV MLHAAVALRR FPAQLGQWRA LRNHMQGIKH
KDSHAWFWQL VTGFILFFLA PVHIFTMITN PEIGPHLSAE RVYHANAWLL YALLLPAVVV
HAMIGLYRVA VKWGLIRHRK GLRKAIKVLI IYLMTLGILS LISYIMIGRS LVLPITPFVP