Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0332 |
Symbol | |
ID | 4923855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 377079 |
End bp | 377801 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640161860 |
Product | fumarate reductase cytochrome b-556 subunit |
Protein accession | YP_001092463 |
Protein GI | 127511266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.475162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTA ACAGCTTGCA GTACCAACAC ACACATTACG CTGCTTTGGG CAGTCCCTGG TCCGCCAAGG CTGACAGAAT ACAGAGTGCC ACCGGCATCT TATTGGGATG TTTTTTGCTG GCGCATCTGC ACTTCGAGTC GAGCATTCTC TTCGGTAAAG AGACCTTCTA TCACGTGGTG CAGTTCCTCG AAGGCGGCAT GTTCAGCAGC ACAGGCCATG GCATGCCGAT AGTGACCAAG GTGTTCTCTA TCTTTATCAT GCTGGTTGTG ATGCTGCATG CGGCGGTGGC GCTGCGTCGC TTCCCGGCCC AGCTGGGGCA ATGGCGCGCG CTGCGTAATC ACATGCAGGG GATCAAGCAT AAAGACAGCC ACGCCTGGTT CTGGCAGCTG GTGACAGGCT TCATCCTGTT CTTCCTGGCG CCGGTGCACA TCTTTACCAT GATCACCAAC CCGGAGATCG GCCCCCATCT GTCGGCCGAG CGTGTCTATC ATGCCAACGC CTGGTTGCTC TACGCCCTGT TGCTGCCCGC TGTGGTGGTG CACGCCATGA TAGGCCTCTA CCGCGTCGCG GTGAAGTGGG GGCTTATCCG TCACCGTAAG GGGCTGAGAA AGGCGATCAA GGTGTTGATC ATCTATCTGA TGACCCTGGG CATCTTGAGC CTCATCTCTT ACATCATGAT AGGCCGATCA CTCGTCTTGC CAATTACGCC ATTTGTGCCA TAA
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Protein sequence | MKVNSLQYQH THYAALGSPW SAKADRIQSA TGILLGCFLL AHLHFESSIL FGKETFYHVV QFLEGGMFSS TGHGMPIVTK VFSIFIMLVV MLHAAVALRR FPAQLGQWRA LRNHMQGIKH KDSHAWFWQL VTGFILFFLA PVHIFTMITN PEIGPHLSAE RVYHANAWLL YALLLPAVVV HAMIGLYRVA VKWGLIRHRK GLRKAIKVLI IYLMTLGILS LISYIMIGRS LVLPITPFVP
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