| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0319 |
|---|
| Symbol | cyaA |
|---|
| ID | 4920868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 364802 |
|---|
| End bp | 367222 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640161847 |
|---|
| Product | adenylate cyclase |
|---|
| Protein accession | YP_001092450 |
|---|
| Protein GI | 127511253 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3072] Adenylate cyclase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAGC AAGAGCATTT TATCGCAACG GCGGAGCGCT TAAACAAAGT GCGTTTAGCG
CGTGCGCTTG CCATGTTGAC GCCTCTGCAG CGTCATCTGA TGCAACTGAT CCCTGTGCTG
TTTCACTATC ATCGTAGTGA CTTCCCTGGC TACAACGGCC CCATGACGCC AAGCGGCGTG
TTCGAATATT TTCCCAGTGA CGATGCCCTA GAGGCCTGCC GTACCTTAGG GCTCAGCGAG
CCCCAGGTGA TCCATCAGCA GCAGAGCGCC CTGTATGGTG TTTATACCAT GGGCAGTACC
GCCAGTTTTG GGCAAAACCC TAAGAGTGAT ATCGACGTCT GGTTGGTGTA TGACCCAACC
CTGGCCGACG ATGAAATCGC TTCCCTGCAG GATAAGTCGC AGCTACTGAC GGCCTGGTTC
GGGCAGCACG ATCTCGAAGT GAATATCTAT CTGGTTCATC CAAAACAGTT TATTTCAAGC
AGTCGCGACG GCGTGGTTCA GACCGCAAGC CTGGGGTGCG AGAATAGTGG CAGCGTGCAG
CACTGGTTGC TGCTGGAAGA ATTTTACCGC AGCCAGATCT GTCTCGGCGG TAAGCGGGTC
GCCTGGTGGC CAGGGGCCGA GGCGATCGAG AGCCATCTCT TTCTGGGGGA CGTGAGTAAC
CTGCCCGCCA GTGAGTATTT CGGCGCCTCC CTGTGGCAGC TCTACAAAGG CTTGGACAAG
CCCCATAAGG CGCTGCTCAA GGTAATGCTG CTGGAGGCCT ATGCCAGCGA TTATCCCAAT
AGTAACCTAG TGACCACCCA GGTGTGGCAA CGCACTCTGG CGGGGGATTT TTCGGCCTTC
AACGATGCCT ATTTTCTCCT GTATCAATCG ATCGAACACT ATCTGGAATA TAAGAACGAT
AAGCGGCGCC TCGAGATCGT ACGTCGCTGC TTCTATTTGA AATGCGGTAT CAGGCTGACG
GTGGCGGAGC ACCCTAAAGA TTGGCGTTAC TATAAGTTGC AATCCTTGGT GACGCGCTGG
GGTTGGTCCG ATAACCTGCT GCGCACCTTA GATCAATGCG CCAGCTGGCA CTGTGGTCAG
TTGCAGTGGT TCAACGAGCA GCTCAATGAG TTGATGCTGG GCTGTTATCA GACCCTCCTA
CAATTTGCCT CGGCCAACAA GCTGAGCGAC AGCCTGAAGA TCTCCGAGTT GGGGCTGTTG
ACCCGCAAGC TACACACCTA CTTTAGCGAG GATGACAAGC AGATCATCAG CCTCAACCGA
CTCTGGACCC GCTCGGTAGC CGAGGCGCAC CTGACGGTGA TCTACAGCCA TAATACCAAG
GAGTATTACC TTTACCGCTG CACCCCAGAA TCGAAAAACT TCATGGGGAA TCGTGCGGTA
TTTCACTCCC ATAGCAAGGC TAAGTTATTG ATTTGGGCCA GCCTGAATGG CGTATCTACC
GCCCAGACTC AGTGGTACGC CTATGGCGAA GGCAAAGGCC AGGATAAGGC GCTCACCAAG
GCGGCCAAGC GTCTGCCCAC TATCATGACG GAGCGTCGCT GGCGGGCATC TAAGCTGGAC
TTGTGTCAGC CGTGGCATTT TCGTCAGCTG CTATTTCTCA TCAATTTCAA TCGCGATGAG
ACCCAGCTGT GGCGGGGGCA GGAGATCATC TTCGACTACA TGAACGCCAA CATCTTCTCC
ATGGGGCGTC ACCACAGGAA TATGGTGCAG TCGCTGGATG TTATCTGTCA AAACAGCTGG
GGAGAGTGGC ACTGCCATCA TTTCGAGGGT AACGAAGCCA TCTTAGATGC CTTGGTCTAC
ATCACCCCTG GCATGCAGCG GGCACCCCAG CAGGTGAAGG TGGATGTGGT GAGCTGCTCC
AGCCGTCTCA GTACCCAGAT AGAGCGCAGC ATCAGCCAGC TGGTTCACCG AGCAAATCGT
ATGTGTACCA AGGCGAAAAC CTCGTCGACT ATGGTGCACC CCTTGCAGGT GGGCGGGATA
AAATATGGCC TGTTTTTCAA CTCCAAGGGC ATGGTGTATC AGGACTTGAG TGAGTCCACG
GCCTTCTATC AACGTCTCTC CAAGCAGCGA ATGCTCGAGC TGCCGCGGCC GGATCTCGGC
AACGAGCCTT TCAGCAAGAT CCCCGAGGTG ATCCAGGATT TTGCCGCCAT AGGTGCGATT
CAATACTTCT TGCGCCCGGG CAAGGAGGGG ATAGACGTAT TTGTGCTGGA TGAAAAAAAT
GAACTGAATC ATTATGTTCA GCCGGGGAAC AACCTAGAGG AGCTGGTGAG TCAGGTGAGT
CATCATCATG CTTTTGCCGA CTCTTATCTG GATAACGAAC GCTTTAATCT ACCGCAGTTT
TTCCGTTTGG TCAGAGTCGA TGGCCGACTG CAGGCGCAGC CCTTTGGGGT CAACGTCGAC
GAGGCAGCCA TCGAATTTTA A
|
|---|
| Protein sequence | MKEQEHFIAT AERLNKVRLA RALAMLTPLQ RHLMQLIPVL FHYHRSDFPG YNGPMTPSGV
FEYFPSDDAL EACRTLGLSE PQVIHQQQSA LYGVYTMGST ASFGQNPKSD IDVWLVYDPT
LADDEIASLQ DKSQLLTAWF GQHDLEVNIY LVHPKQFISS SRDGVVQTAS LGCENSGSVQ
HWLLLEEFYR SQICLGGKRV AWWPGAEAIE SHLFLGDVSN LPASEYFGAS LWQLYKGLDK
PHKALLKVML LEAYASDYPN SNLVTTQVWQ RTLAGDFSAF NDAYFLLYQS IEHYLEYKND
KRRLEIVRRC FYLKCGIRLT VAEHPKDWRY YKLQSLVTRW GWSDNLLRTL DQCASWHCGQ
LQWFNEQLNE LMLGCYQTLL QFASANKLSD SLKISELGLL TRKLHTYFSE DDKQIISLNR
LWTRSVAEAH LTVIYSHNTK EYYLYRCTPE SKNFMGNRAV FHSHSKAKLL IWASLNGVST
AQTQWYAYGE GKGQDKALTK AAKRLPTIMT ERRWRASKLD LCQPWHFRQL LFLINFNRDE
TQLWRGQEII FDYMNANIFS MGRHHRNMVQ SLDVICQNSW GEWHCHHFEG NEAILDALVY
ITPGMQRAPQ QVKVDVVSCS SRLSTQIERS ISQLVHRANR MCTKAKTSST MVHPLQVGGI
KYGLFFNSKG MVYQDLSEST AFYQRLSKQR MLELPRPDLG NEPFSKIPEV IQDFAAIGAI
QYFLRPGKEG IDVFVLDEKN ELNHYVQPGN NLEELVSQVS HHHAFADSYL DNERFNLPQF
FRLVRVDGRL QAQPFGVNVD EAAIEF
|
|---|
| |