| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0309 |
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| Symbol | |
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| ID | 4924269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 335256 |
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| End bp | 335861 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640161837 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001092440 |
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| Protein GI | 127511243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.350463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCCT TACTGATTAT TCTAAGCGTC GCCTTACTGG GCGGCTGCGC TTCGCGCGAC
ATAGTAACCA TGGATACCCC GACCAATCAG GTATTCGATC TTAACGACAA AGATAAAGAT
GGCGTCATCG TCGCCCGTGA GCGCTGTAAC GACACAGTGC TAGGTGCCAC CATAGACAAC
TACGGCTGTG GTAAGATTAA GCCTATCAAT GAGCGTCAAG AACTTAAGAT ATTGTTTGCC
AACGATTCTT ACTACATAGA TCCTCAGTAC TATGATCAGG TAGAAGTGGT TGCGACTTTC
ATGAGACAGT ACCCCAACAC TAAGGTGACC ATCGAAGGTC ACTGTAGTAA GACGGGTAGC
TATGAGCACA ACCTAGCGCT GTCGCAAAAC CGCGCCGACG CCGTGACCTC GCTGTTGTCT
GAGCGATTCG GTATCGCCAG CGATCGTCTG ACGGCCATAG GCTACAGCTA CGACAGACCG
GTAGATCCTA CTCATACCAA GATGGCACAC ACACGTAACC GCCGCGTGAT CGCAGAGGTA
ACGGGTGAAG ATACCAAGGC CGATATGAAG TGGACCATCT ACACAGTTGA TGAACAAGTA
AAATAA
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| Protein sequence | MKALLIILSV ALLGGCASRD IVTMDTPTNQ VFDLNDKDKD GVIVARERCN DTVLGATIDN
YGCGKIKPIN ERQELKILFA NDSYYIDPQY YDQVEVVATF MRQYPNTKVT IEGHCSKTGS
YEHNLALSQN RADAVTSLLS ERFGIASDRL TAIGYSYDRP VDPTHTKMAH TRNRRVIAEV
TGEDTKADMK WTIYTVDEQV K
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