Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0301 |
Symbol | |
ID | 4923906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 323549 |
End bp | 324049 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640161825 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001092432 |
Protein GI | 127511235 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAC TACAACTCGA CAAGACCGAC ATTCAGATCC TCAAGTTACT GCAAGCCCAG GGACGCATGG CCAACCAAGA TCTGGCCGCA AGCGTCGGCC TGTCGCCCTC GCCCTGCTCG CGCCGGGTCA AGGCGATGGA GGAGGCGGGC ATCATCGCCG GTTACGCCGC CTTAGTCGAT GCCCCTTACT TTCAGTTAAC CCTGACCGCC TACGTGCAGG TGAGGCTGGA AAAACACACC CAAGCGATAC TCGATGCATT CGAGCAGGCC ATCGACGGCT ATGACGAGGT ACTCGAATGC GCCCTACTGA CAGGCAGCGA CGCCGATTAC CAACTCAAGG TCTTAGTCAG AGACATGGAT GCCTTCAAAC ACTTCCTGCT AGAGAAGCTC ACCAGCAACC CGCATATCGC TGGCATACGC TCAAGCTTCG TGCTTAAACA GGTCAAGAGC CGCACCGCTA TTCCCCTGCC TGAACTCGGC ACTCAAGACG ATAAAGCATG A
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Protein sequence | MTRLQLDKTD IQILKLLQAQ GRMANQDLAA SVGLSPSPCS RRVKAMEEAG IIAGYAALVD APYFQLTLTA YVQVRLEKHT QAILDAFEQA IDGYDEVLEC ALLTGSDADY QLKVLVRDMD AFKHFLLEKL TSNPHIAGIR SSFVLKQVKS RTAIPLPELG TQDDKA
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