| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0288 |
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| Symbol | |
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| ID | 4920619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 306553 |
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| End bp | 308034 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640161812 |
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| Product | ketol-acid reductoisomerase |
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| Protein accession | YP_001092419 |
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| Protein GI | 127511222 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0059] Ketol-acid reductoisomerase |
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| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.144454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATT ACTTTAACTC TCTGAATTTA CGCCAACAAT TAGAGCAGCT TGGTCAGTGT
CGTTTTATGG ACCGCAGCGA ATTTAGTCAA GGCTGTGACT ATATCAAGGG CTGGAATATC
GTCATCCTGG GCTGTGGCGC CCAAGGCCTT AACCAGGGCC TCAACATGCG CGATTCGGGC
CTGAATATCT CCTTTGCCCT GCGCGAGCAG GCGATTGCCG AGCAGCGTCC TTCCTACCAG
AAAGCCACTG GCAACGGTTT CCGTGTCGGC ACCTTCGAAG AGCTGATTCC TGATGCGGAT
CTGGTGCTTA ACCTGACCCC AGACAAGCAA CACACGGATG CAGTTAATGC CGTGATGCCA
CTGATGAAGC AGGGCGCGGT ACTCTCTTAC TCTCACGGAT TCAACATAGT GGAAGAGGGA
ATGCAGGTGC GTCCCGACAT CACAGTCATC ATGGTGGCAC CTAAGTGCCC GGGTACCGAG
GTGCGCGAAG AGTACAAGCG TGGTTTCGGT GTACCTACCC TGATCGCCGT GCACCCTGAA
AACGATCCTA AGGGCGATGG CCTGGAAGTG GCCAAGGCCT ATGCCAGCGC TACCGGTGGC
GATCGCGCCG GCGTGCTGCA CTCCTCTTTC ATCGCCGAGG TGAAGTCAGA CTTAATGGGC
GAGCAGACCA TCTTGTGTGG CATGCTGCAA ACCGGTGCCA TTCTGGGCTA TGAGAAGATG
GTGGCCGACG GTATCGAGCC AGGCTACGCC GCCAAGCTTA TCCAGCAAGG TTGGGAGACT
ACCACAGAGG CGCTTAAGCA TGGTGGTATC ACTCACATGA TGGATCGTCT CTCAAACCCT
GCCAAGATCA AGGCATTCGA GATGGCTGAG GAGCTCAAAG CGATTCTGCA GCCACTGTTT
GAGAAGCACA TGGACGACAT CATCAGCGGT GAGTTCTCTA AGACCATGAT GGAAGATTGG
GCCAACGACG ATGCCAACTT GCTGAAATGG CGCGCCGAGA CCAACGAAAC TGGCTTCGAG
AATGCCCCTG CATGTGATGA GGCGATCGAC GAGCAGACCT ACTTCGATAA GGGGATCTTC
CTGGTCGCCA TGATCAAGGC GGGTGTGGAA CTGGCCTTCG ATACCATGGT TTCAGCCGGT
ATCGTCGAAG AGTCGGCCTA CTATGAGTCG CTGCATGAGA CACCGCTTAT CGCCAACACC
ATCGCCCGTA AGCGTCTTTA CGAGATGAAC GTGGTGATCT CTGATACCGC CGAATATGGC
TGTTATTTGT TTAACCATGC GGCCGTGCCA TTGCTGCGTG ACTATGTGAA TCAGATGTCT
CCCGAATACC TGGGCGGCGG CCTGAAAGAC AGTGGCAACG GCGTCGACAA CCTGCGTCTG
ATCGAGGTGA ACGATGCTAT CCGCCATACC GCGGTTGAGT ACATAGGCGC CGAGCTTCGC
GGTTACATGA CCGAGATGAA GCGCATCGTA GAAGAAGCTT AA
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| Protein sequence | MANYFNSLNL RQQLEQLGQC RFMDRSEFSQ GCDYIKGWNI VILGCGAQGL NQGLNMRDSG
LNISFALREQ AIAEQRPSYQ KATGNGFRVG TFEELIPDAD LVLNLTPDKQ HTDAVNAVMP
LMKQGAVLSY SHGFNIVEEG MQVRPDITVI MVAPKCPGTE VREEYKRGFG VPTLIAVHPE
NDPKGDGLEV AKAYASATGG DRAGVLHSSF IAEVKSDLMG EQTILCGMLQ TGAILGYEKM
VADGIEPGYA AKLIQQGWET TTEALKHGGI THMMDRLSNP AKIKAFEMAE ELKAILQPLF
EKHMDDIISG EFSKTMMEDW ANDDANLLKW RAETNETGFE NAPACDEAID EQTYFDKGIF
LVAMIKAGVE LAFDTMVSAG IVEESAYYES LHETPLIANT IARKRLYEMN VVISDTAEYG
CYLFNHAAVP LLRDYVNQMS PEYLGGGLKD SGNGVDNLRL IEVNDAIRHT AVEYIGAELR
GYMTEMKRIV EEA
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