Gene Shew_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0261 
Symbol 
ID4920861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp280637 
End bp280948 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID640161785 
Producthypothetical protein 
Protein accessionYP_001092392 
Protein GI127511195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000519584 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0135587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCA TGATGGCTTT CGCGGCGTTA CTATTAACTA TGACGGCTTG TACTCAGGTG 
CCACAATGGA CCCTCTTCTA TTATCCCGAT GCGGCGCCGG GTGAATCCGC CGAGGTGCTG
GCGAGTCAAG GTGAGCTGGA TCAGCACATA AGCGGCTACT ATCTGCAGCT AGATCAGTGC
CTGGCAAAGG GCGCCGGTAT GGTGAAGCTG AGTCAGACGG GTAGCGGCAG TTATCTGTGC
GGTGAACTAT GTCAGCGCAA TGAGGCGGGC GCGCTTAAGT GTCAACGCCT GGAAACTCTG
GCAAGCCAGT GA
 
Protein sequence
MRSMMAFAAL LLTMTACTQV PQWTLFYYPD AAPGESAEVL ASQGELDQHI SGYYLQLDQC 
LAKGAGMVKL SQTGSGSYLC GELCQRNEAG ALKCQRLETL ASQ