Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0259 |
Symbol | |
ID | 4920838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 278814 |
End bp | 279215 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640161783 |
Product | hypothetical protein |
Protein accession | YP_001092390 |
Protein GI | 127511193 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000510441 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0378607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG AGATTCTAAG TGGTAAGCTG CTGCGAGAGT TTAAGACCAT CGCCGCCATG GTACATATCT ATTGCAAAGA CCACTGCCAA GCCAAGGGCG ATGTGGCTAA CTGCCCAGAA TGCAGCGAGT TTCTCGAGTA TGCCCACACC AGGCTCGACC GCTGCCCCTA CGGTCAGGAC AAACCCACCT GCAACAAGTG CCCTGTGCAT TGCTACAAGC CTGAGCCGAA GGCCAAGGCG AGAGAGATAA TGATCTATTC CGGCCCGCGC ATGCTGCTGC CCCACCCCAT CATGGCGATA CGTCACCTGT GGGCCGAACG CGGCCCTGTG CCGGGCAAGC CGCCCGCGGC GGCATCTAAC CGCCACCTGC GTCTGGCCAA GGAGCAGAAA CCCTCCTCTT AG
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Protein sequence | MSQEILSGKL LREFKTIAAM VHIYCKDHCQ AKGDVANCPE CSEFLEYAHT RLDRCPYGQD KPTCNKCPVH CYKPEPKAKA REIMIYSGPR MLLPHPIMAI RHLWAERGPV PGKPPAAASN RHLRLAKEQK PSS
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