| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0245 |
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| Symbol | |
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| ID | 4922896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 262483 |
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| End bp | 265521 |
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| Gene Length | 3039 bp |
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| Protein Length | 1012 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161769 |
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| Product | molydopterin dinucleotide-binding region |
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| Protein accession | YP_001092376 |
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| Protein GI | 127511179 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAC GTAAGTTTTT AACTCAAGCC GGTCTGGTAT CTGCCGCGAC CATCACAGGT
GCCGCCTGCA GTCGAGTCGA TGCCGAGTCT GAGCCCAAGA AGACCCAGGA CATTTCACGC
TTTGGTCATC CCGTGGCGGC CGAAGGGGGC TTCGATGCCC AGGGTAAATG GCAAAAGACA
GCAGGAGTAC GCACCGTCTA TTCCCGCTGC TTTAGCTGTT ACAACATCTG CGGCCTCAGG
GTGCGAGTGG ATGAGAAGAC AGACAGAGTC TTGAAGGTGG GGGGCAACCC CTATTGTGAG
AACAACTCCG GCTCGCCACT GCCGCTGAGC ACAGAGGTGA AGCAGAGCTT TATCGCCCTG
GCGGGTGAGG CGGGGCTGAA GAATCGCGCC ACCACCTGTG CCAAGGGGGC CAGCTGCGTC
GATTCGGTGG ACGATGAGCG CCGGGTGACT CGGGTGCTAA AACGCGCGGG CAAGCGCGGC
GGTGGCGAGT GGGTCACCAT CAGCTATGAA CAGGCACTTG CGGAGATTAT CGAGGGGGGC
GATCTCTTTG GCGAAGGCCA TGTCGATGGC CTGCGCGCCA TTCGCCAGCT GGATCAAGAG
GTGAAGCCGG GCCATAGCGA ATTTGGCAGC AAAGCGAATC AGCTGTTTGC CACCTTCTGC
GCCGAAGATT ATTTGCGCGG AAGCTTCTAT TCTCGCTTCA TGATGCAGTC ATGGGGCACG
GTTAACCTGG GGACTAAACA CGCCTACTGT GGCGCCGCCC AGGCAACGGG TTATAGCCTG
GGGATGGCGG CCGGATTCGA AGAGTGGCTC AACGATGTCG ACTGGGAAAA CGTCGAGTAT
GGCCTGTTTA TGGGCACCAG CCCAGGCTCC TCGGGTGTCA GCCTGAACCG CGTCGGTCGA
GGTCTTGCTA ACAGCCGTGT GGACCGTGGC TTTAAATATG TGTGTGTCGA CCCCCTGCTG
CGTACCACGG TCGCCGCCGA TACCAATGCC ACCTGGCTAC CGGTCAAACC CGGTCAGGAT
GCGGCATTCT CCTTTGGGGT GATCCGCACC ATGCTCGAGG AGCAGTGGTT TAACAAGGCG
CACCTGGAAA ATCCGAGCCA GAAGGCGGCC GAGGCCTCGG GTGAGCTTAA CTACACCAAC
GCAGGTCACC TAGTGGTGAT GGATCCTAAG CACCCAGAGT ATCGCAAGTT TGCCAAGGCG
AAAGATTTTG GTCTGGGTGG CGATGAGGCA CTGATCATCA AGGCGGGCAC TCAGACCTTA
GCGTCGGCGG AGTCAGGCGA CAAGGCCGAG CTGTTTGTCA GCAAACGTGT CACCGACAGC
CGTGGCCGTA AGGTGACCTT GATGTCGTCT CTCTATCTGC TGCGGGCCGA GGCCCAGCGC
ACCAGCATGG AGGAGTACGC CAAGCGCAGC GGCATTGCGG TAAAAGAGAT GCGTCAGGTG
GCGAAAGATC TGGCGCACTA TGGCCGCAAG GCCTGTGTGG CAGGCAACGG CGGCACCAAC
TCATCTGATG GTTTCGTGAT GGGCTGGATC TGGGCGACGC TTAATACCCT GGCGGGTTCC
CACGATGCCA AGGGCGGCGC CATCTATGGC AATGGCCCCA TCGGCGGCAT GGAAGGTTTG
TACGATCTGG CCAACATCGA AGGTGGCGTG TCGCTGGACG GTATCGTCAA CGCCTGTCGC
GATGGTGCCT ACGAGGCCTC GACCGAATAT CGTCTCAAGG TGGAGCAGGG TAAGAACCCT
TATCCCGCCA GCACCCCTTG GCATGAGGTT CTGCCCGCCA TGAATGCGGC CGAGCAGTGG
ACCAGCCACG CCAACGGCGA CCCCTACAGC GCCAAGGTGC TGTTCAACTG GCGCAACAAC
TTCCTCTATA GCGCGGCGTC TATCAGTCAG GAGGTTGTGG CCAGCATCGC CGATCCTAAG
CGTTTGCCGC TGGTGGTGGG GATCGACTGC CACATGAACG AGACCAATCG CTACGCCGAC
TACCTGATCC CGGATCGCTC CATGCTCGAA GAGTATGCGG CGGATCGCAT GTGGGGCGCC
CATAAACTGG GCGTGGTGGC GGCATCGCCT GTGGTGACTC CGAGAACCGA GAAAAATGAG
GCGGGTGAGC ATATCTGCAT GGAGCAGTTG CTGATCGATA TCGCCCTCAA ACTCGACTTG
CCTGGCTTCG GTAAGGGTGC CCTGGCGAGC AGCGATGGCC GTAAGGTGGA CCTGTTAACC
TTCGAAGATT GGCACGCCAG ATACCTGGCC AACGTGGCCG CCCAGTGCGA GCAGCTGCCT
AAGGTGACCG AGGAAGATCG CCTGTGGGCC GGGTTGGATT ACGCCATGAA GCCGCTCAAG
CCAAGACTTA CCGCCGAGGA GGCCGCCAAG GTCGAGGCCC TGCTGTCACG CGGTGGTTAC
TACCAGGAAG ATGACCGTTA TGACGGCGAC TTCATCAAGG GCGCTGGGCC TAAATGTCTG
CAGATCTATC ATCAGGAGGT AGCGCAGCTG CGTCATGCTT ACTCGGGCGA GTTTTACCCA
GGCACGCCGA CCCTGCAGGA ACATAAGTTC TGGAACGGTG ACACCTGGGA GAGCCATTGG
CCCCAGAGCG AATATCCGCT GCTGTTCTCC AGCTACAAGG CGACGGTGCG CTCTAATTAT
GCGGTGGCCT TCAAGCGGAT CGGTGAGATC AGTCCCACCA ACTTCGTCTA TATACACACA
GATACCGCCA AGGCCCAGGG GCTGAAGGAT GGCGACCAGG TGCGCATAGT GACCGCCAAC
GGCAAGCCCT GCGTCGGCAC CCTGCAGACA GATGTGGGGG TCGCCAAGGG GGCAATCTGT
GTCTCCCATG GCTTTGGTCA TAGCGAGGGC TTTGGCGGTG ACGATCGCAT CATCAACGGC
GAGAGATTAG CGGGAATCGC CAATCGCGCC GGCGGCACGG CGGTTAACCA GATGATCCCG
GCGGATCCGA CCCGCAACGG CGCCGCCAGT ATGCTCAACG ACTACTGGAC CGGAGCCAAC
TGCCGTCACG GCATTCCGGT GCGGGTGGAG AAAGCCTAA
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| Protein sequence | MDRRKFLTQA GLVSAATITG AACSRVDAES EPKKTQDISR FGHPVAAEGG FDAQGKWQKT
AGVRTVYSRC FSCYNICGLR VRVDEKTDRV LKVGGNPYCE NNSGSPLPLS TEVKQSFIAL
AGEAGLKNRA TTCAKGASCV DSVDDERRVT RVLKRAGKRG GGEWVTISYE QALAEIIEGG
DLFGEGHVDG LRAIRQLDQE VKPGHSEFGS KANQLFATFC AEDYLRGSFY SRFMMQSWGT
VNLGTKHAYC GAAQATGYSL GMAAGFEEWL NDVDWENVEY GLFMGTSPGS SGVSLNRVGR
GLANSRVDRG FKYVCVDPLL RTTVAADTNA TWLPVKPGQD AAFSFGVIRT MLEEQWFNKA
HLENPSQKAA EASGELNYTN AGHLVVMDPK HPEYRKFAKA KDFGLGGDEA LIIKAGTQTL
ASAESGDKAE LFVSKRVTDS RGRKVTLMSS LYLLRAEAQR TSMEEYAKRS GIAVKEMRQV
AKDLAHYGRK ACVAGNGGTN SSDGFVMGWI WATLNTLAGS HDAKGGAIYG NGPIGGMEGL
YDLANIEGGV SLDGIVNACR DGAYEASTEY RLKVEQGKNP YPASTPWHEV LPAMNAAEQW
TSHANGDPYS AKVLFNWRNN FLYSAASISQ EVVASIADPK RLPLVVGIDC HMNETNRYAD
YLIPDRSMLE EYAADRMWGA HKLGVVAASP VVTPRTEKNE AGEHICMEQL LIDIALKLDL
PGFGKGALAS SDGRKVDLLT FEDWHARYLA NVAAQCEQLP KVTEEDRLWA GLDYAMKPLK
PRLTAEEAAK VEALLSRGGY YQEDDRYDGD FIKGAGPKCL QIYHQEVAQL RHAYSGEFYP
GTPTLQEHKF WNGDTWESHW PQSEYPLLFS SYKATVRSNY AVAFKRIGEI SPTNFVYIHT
DTAKAQGLKD GDQVRIVTAN GKPCVGTLQT DVGVAKGAIC VSHGFGHSEG FGGDDRIING
ERLAGIANRA GGTAVNQMIP ADPTRNGAAS MLNDYWTGAN CRHGIPVRVE KA
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