Gene Shew_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0234 
Symbol 
ID4921356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp250076 
End bp250435 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content61% 
IMG OID640161758 
Producthypothetical protein 
Protein accessionYP_001092365 
Protein GI127511168 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.74255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CACATCGCGG CCAAAATGGT GAGGCTGGAG TCGATGGTTA CAGCGACGAG 
GGCTTTTGGC ACAAGGTTAA GCAGTTTGCC AAGCTGGCCG GGCGCGAGGT GATCGACAAT
GCCCTGTGCC TCTACTATGC GGCGCAAAGG CCGGACACGC CCAAGTGGGC CAAGACGGTG
ATCTTCGGCG CCCTGGCTTA TTTCATCACG CCGCTGGACG CCATACCGGA TCTCACTCCT
GTGGTGGGAT TCTCAGACGA TCTCGGCGCC CTGGCCGCGG CGCTGGCCAT GGTCTGCATG
TATATCGATG ACAGCGTGAA GCGTCAGGCG GCCGAGAAGC GCTCGGCTTG GTTCGACTGA
 
Protein sequence
MSDSHRGQNG EAGVDGYSDE GFWHKVKQFA KLAGREVIDN ALCLYYAAQR PDTPKWAKTV 
IFGALAYFIT PLDAIPDLTP VVGFSDDLGA LAAALAMVCM YIDDSVKRQA AEKRSAWFD