Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0234 |
Symbol | |
ID | 4921356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 250076 |
End bp | 250435 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640161758 |
Product | hypothetical protein |
Protein accession | YP_001092365 |
Protein GI | 127511168 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.74255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACT CACATCGCGG CCAAAATGGT GAGGCTGGAG TCGATGGTTA CAGCGACGAG GGCTTTTGGC ACAAGGTTAA GCAGTTTGCC AAGCTGGCCG GGCGCGAGGT GATCGACAAT GCCCTGTGCC TCTACTATGC GGCGCAAAGG CCGGACACGC CCAAGTGGGC CAAGACGGTG ATCTTCGGCG CCCTGGCTTA TTTCATCACG CCGCTGGACG CCATACCGGA TCTCACTCCT GTGGTGGGAT TCTCAGACGA TCTCGGCGCC CTGGCCGCGG CGCTGGCCAT GGTCTGCATG TATATCGATG ACAGCGTGAA GCGTCAGGCG GCCGAGAAGC GCTCGGCTTG GTTCGACTGA
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Protein sequence | MSDSHRGQNG EAGVDGYSDE GFWHKVKQFA KLAGREVIDN ALCLYYAAQR PDTPKWAKTV IFGALAYFIT PLDAIPDLTP VVGFSDDLGA LAAALAMVCM YIDDSVKRQA AEKRSAWFD
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