Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0228 |
Symbol | |
ID | 4924073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 241543 |
End bp | 242385 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640161751 |
Product | uroporphyrin-III C/tetrapyrrole methyltransferase |
Protein accession | YP_001092359 |
Protein GI | 127511162 |
COG category | [R] General function prediction only |
COG ID | [COG0313] Predicted methyltransferases |
TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.330626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGT CGGTCGCACT TTACATAGTT CCTACTCCAA TCGGTAACCT TGGAGATATC AGCAGCCGCG CCCTAGAGGT ATTGAATCAG GTATCCCTTA TCGCCTGTGA GGACACCCGC CATAGCGGTA AATTGCTGAG CCATTTCGGC ATAGAGACCC GCAAGACGGC GCTGCATGAT CACAACGAAC GCGACCGGGC TCAGGGGATC ATCCAGAAGC TGGCCAATGG TGAGTCTGTG GCGCTGATCT CCGATGCCGG TACGCCGTTG ATCTCCGATC CTGGCTATCA TCTGGTGTCA CAGGTGCGTG AAGCCGGTTT CAAGGTGGTG CCGCTGCCGG GCCCCTGTGC GGCTATCACG GCGCTGAGCG CCTCTGGGCT GCCGTCGGAT CGCTTCTCGT TCGAGGGCTT TCTGCCCGCC AAGGAGAAGG GACGTCTCGA TAAACTGACC GAACTGAAAG AAGATCCTCG CACCCTGATC TTCTACGAGT CGCCACATCG CATCGTTCAC AGCCTAACCT CTATCGTGGC GGCGCTTGGC GGCGATCGTC AGGTGGTGAT GGCCCGTGAA GTCACCAAGA CCTTCGAGAC CTTCCTCTCT GGCCCCGCCG CTGAGGTGCT TGCGACAGTG AGTGAGGATC CCAACCAGCA GAAGGGCGAA ATTGTGCTCA TGTGCCACGG ACATCGCACA GATGAAGATG CCGGCGTGCC CGCCCAGGCG CTGGAGACGC TAAAGTTACT GAGTCAGGAG CTACCGCTGA AGAAGGCATC GGCGCTGGCG GCGCAGATCC ATGGGCTGAA GAAGAACGCC CTCTATAAGC TGGGCCTAGA GCTGGATCTC TAG
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Protein sequence | MDLSVALYIV PTPIGNLGDI SSRALEVLNQ VSLIACEDTR HSGKLLSHFG IETRKTALHD HNERDRAQGI IQKLANGESV ALISDAGTPL ISDPGYHLVS QVREAGFKVV PLPGPCAAIT ALSASGLPSD RFSFEGFLPA KEKGRLDKLT ELKEDPRTLI FYESPHRIVH SLTSIVAALG GDRQVVMARE VTKTFETFLS GPAAEVLATV SEDPNQQKGE IVLMCHGHRT DEDAGVPAQA LETLKLLSQE LPLKKASALA AQIHGLKKNA LYKLGLELDL
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