Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0225 |
Symbol | |
ID | 4923913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 238547 |
End bp | 239140 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640161748 |
Product | phosphoheptose isomerase |
Protein accession | YP_001092356 |
Protein GI | 127511159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0706313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.114772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAGAAC GTATTAAAGA CAGTTTTACC CACTCTATCC AGACCAAGAT CGATGCGGCT GAGGCGCTAC CTGAGTCTAT TGAGAAGGCG GCCGAGATGA TGGTGCAGTG TCTACTTGGC GGCAACAAGA TCTTAGCCTG TGGTAACGGT GGCAGCGCCG GCGATGCACA GCATTTCTCT GCTGAGCTGC TGAACCGCTA CGAGATCGAG CGTCCGCCAC TACCGGCCAT CGCCCTGACA ACCGACACCT CGACCATCAC CGCGATTGGT AACGACTACA GCTATGACGA GATCTTCTCT AAGCAGATCC TGGCACTGGG TCAACCTGGC GACATCTTGC TGGCCATCTC GACCAGTGGT AACTCGGGTA ACGTGATCAA GGCGATGGAA GCGGCGCTAA GCCGTGACAT GACGATCGTG GCCCTCACGG GTAAGGATGG CGGCGCCATG GCCGGTCTGA TGGGCACAAA CGACGTGGAA GTGCGCGTAC CTTCAAACGT CACCGCGCGT ATTCAGGAAG TGCACCTGTT AGTGATCCAC TGCCTGTGCG ACAACATCGA CCGCACCCTC TTCCCGCAGG ATGACCAGGC ATGA
|
Protein sequence | MLERIKDSFT HSIQTKIDAA EALPESIEKA AEMMVQCLLG GNKILACGNG GSAGDAQHFS AELLNRYEIE RPPLPAIALT TDTSTITAIG NDYSYDEIFS KQILALGQPG DILLAISTSG NSGNVIKAME AALSRDMTIV ALTGKDGGAM AGLMGTNDVE VRVPSNVTAR IQEVHLLVIH CLCDNIDRTL FPQDDQA
|
| |