| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0224 |
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| Symbol | |
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| ID | 4923902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 237981 |
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| End bp | 238550 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161747 |
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| Product | transport-associated |
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| Protein accession | YP_001092355 |
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| Protein GI | 127511158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.130883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.197651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGCTC TGCTCCCAAT CCTAGCCGTA CTCTTGCTGT TACAAGGCTG CGCCGGGGCC
GTGATGGTCG GCGCAGTGGG TGGGGCCATG ATGGCCAACG ATGAACGCAG CTTCTCGACC
CAACTGGACG ACACCAACGC TGACTTTCAG ATCGCCAGTG CCCTGGCGGC ACACGAAGAT
ATTAAGAACC AAACCAATAT CACTGGTGTG GCGATGAACG GCAACGTGCT CATGATAGGC
CAGGCGCCAA GCTCCATGCT GCGTGACAAG GCGATCAACA CAGTGCAAAA ACTTAACCTG
GGCGGCAAGA TCCACAATCA GATCCGCATA GGTAACCCGA CCTCCTTCAC CACCCGCAGC
AACGACACCT GGATCACCAC CAAGGTGAAG ACGCGTATGC TCAACGACAA AGATCTGGAT
GTCACCCGCA TCAAGGTGAT CACCGAAAAT GGCGAGGTCT TCCTCCTGGG TGTCGTGAGT
CGCGATCAGG CCGATCTGGC GGTGGATATC GCCCGCAACA CGGCCGGTGT ACGCAAGGTT
ATCAAGGTCT TCGATACGCC AAACAGCTAG
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| Protein sequence | MRALLPILAV LLLLQGCAGA VMVGAVGGAM MANDERSFST QLDDTNADFQ IASALAAHED
IKNQTNITGV AMNGNVLMIG QAPSSMLRDK AINTVQKLNL GGKIHNQIRI GNPTSFTTRS
NDTWITTKVK TRMLNDKDLD VTRIKVITEN GEVFLLGVVS RDQADLAVDI ARNTAGVRKV
IKVFDTPNS
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