Gene Shew_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0217 
Symbol 
ID4923683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp232910 
End bp233083 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content53% 
IMG OID640161740 
Producthypothetical protein 
Protein accessionYP_001092348 
Protein GI127511151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0439788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCAAC TCTTTCTTAG CACCCTGGCC GCCTTCTTTG GCGTACAGAC AGAGCAAAAC 
CGCGTTCGCG ACTTTCAGTC CCGCTCGCCG GTGCCCTTTA TAGTGATGGG GATTCTATTG
GCCATCGCAC TGGTCGCTTC ACTCATCTTT ATCGTGAAAC TTGTGCTGGC CTAG
 
Protein sequence
MLQLFLSTLA AFFGVQTEQN RVRDFQSRSP VPFIVMGILL AIALVASLIF IVKLVLA