| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0210 |
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| Symbol | |
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| ID | 4923537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 225359 |
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| End bp | 225982 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640161733 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_001092341 |
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| Protein GI | 127511144 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0216288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0081665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTCG ATCTGAGTGA ATTCAATGAT ATCGATTTTG AGAACATTGG CGGTTGGCCT
ACCCAGGTTA AGGTGGTATT CGCGTCTTTC CTGGCCATCA TTATCTTCGT CGCAGGATAT
TTCCTGTTTG TCTCGGATGC CATCGATGTG CTTAAGCGTG AGCAAGACAA AGAGATCACC
TTGCGGGATG ATTTTAAAGC GAAATATCAA TTAGCGGCTA ATCTTAAGTT GTATCGGGAG
CAACTGGCAG TCATGGAAGT TCAGTTTGCA GAGCTGCTGA AAATGTTGCC GTCGCAGAAT
GAGATGCCTG GCCTGCTCGA CGATTTAACT TTCGTGGCGA CCGATTCAGG GCTGGGGATT
CAGAGCCTGG AGTGGCAAGA AGAGATACAA CGCGATTTCT ATATCGAGTT CCCTATCAGC
ATGTCGGTAA CGGGCAATTA TCATGAGATG GGCCATCTGG TCAGTGGCGT GGCTAAACTG
CCGCGTATCG TGAGCCTGCA TGACTTCGTG ATCAAGCGCA GTGACAGCGG TGAGCTCGCC
ATGGAGATCT TGGCCAAGAC CTATCGTTTC AAAGAGGGAG CCCAGCTCCC GAAAGATAAT
GCGGCGAAGG GGGCGAAGAA ATGA
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| Protein sequence | MKLDLSEFND IDFENIGGWP TQVKVVFASF LAIIIFVAGY FLFVSDAIDV LKREQDKEIT
LRDDFKAKYQ LAANLKLYRE QLAVMEVQFA ELLKMLPSQN EMPGLLDDLT FVATDSGLGI
QSLEWQEEIQ RDFYIEFPIS MSVTGNYHEM GHLVSGVAKL PRIVSLHDFV IKRSDSGELA
MEILAKTYRF KEGAQLPKDN AAKGAKK
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